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天然光敏剂作为猴痘病毒进入抑制剂增强靶向抗菌光动力疗法:一种计算机模拟方法。

Natural photosensitizers potentiate the targeted antimicrobial photodynamic therapy as the Monkeypox virus entry inhibitors: An in silico approach.

机构信息

Dental Research Center, Dentistry Research Institute, Tehran University of Medical Sciences, Tehran, Iran.

Department of Microbiology, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran; Fellowship in Clinical Laboratory Sciences, BioHealth Lab, Tehran, Iran.

出版信息

Photodiagnosis Photodyn Ther. 2023 Sep;43:103656. doi: 10.1016/j.pdpdt.2023.103656. Epub 2023 Jun 17.

Abstract

BACKGROUND

Monkeypox is a viral zoonotic disease that has emerged as a threat to public health. Currently, there is no treatment approved specifically targeting Monkeypox disease. Hence, it is essential to identify and develop therapeutic approaches to the Monkeypox virus. In the current in silico paper, we comprehensively involve using computer simulations and modeling to insights and predict hypotheses on the potential of natural photosensitizers-mediated targeted antimicrobial photodynamic therapy (aPDT) against D8L as a Monkeypox virus protein involved in viral cell entry.

MATERIALS AND METHODS

In the current study, computational techniques such as molecular docking were combined with in silico ADMET predictions to examine how Curcumin (Cur), Quercetin (Qct), and Riboflavin (Rib) as the natural photosensitizers bind to the D8L protein in Monkeypox virus, as well as to determine pharmacokinetic properties of these photosensitizers.

RESULTS

The three-dimensional structure of the D8L protein in the Monkeypox virus was constructed using homology modeling (PDB ID: 4E9O). According to the physicochemical properties and functional characterization, 4E9O was a stable protein with the nature of a hydrophilic structure. The docking studies employing a three-dimensional model of 4E9O with natural photosensitizers exhibited good binding affinity. D8L protein illustrated the best docking score (-7.6 kcal/mol) in relation to the Rib and displayed good docking scores in relation to the Cur (-7.0 kcal/mol) and Qct (-7.5 kcal/mol).

CONCLUSIONS

The findings revealed that all three photosensitizers were found to obey the criteria of Lipinski's rule of five and displayed drug-likeness. Moreover, all the tested photosensitizers were found to be non-hepatotoxic and non-cytotoxic. In summary, our investigation identified Cur, Qct, and Rib could efficiently interact with D8L protein with a strong binding affinity. It can be concluded that aPDT using these natural photosensitizers may be considered an adjuvant treatment against Monkeypox disease.

摘要

背景

猴痘是一种病毒性人畜共患病,已成为公共卫生的威胁。目前,尚无专门针对猴痘病的治疗方法。因此,有必要识别和开发针对猴痘病毒的治疗方法。在目前的计算机模拟论文中,我们全面采用计算机模拟和建模,深入了解和预测天然光敏剂介导的靶向抗菌光动力疗法(aPDT)对 D8L 的潜在作用,D8L 是一种参与病毒细胞进入的猴痘病毒蛋白。

材料和方法

在本研究中,将分子对接等计算技术与计算机模拟 ADMET 预测相结合,研究姜黄素(Cur)、槲皮素(Qct)和核黄素(Rib)等天然光敏剂与猴痘病毒中 D8L 蛋白的结合方式,并确定这些光敏剂的药代动力学特性。

结果

使用同源建模(PDB ID:4E9O)构建了猴痘病毒中 D8L 蛋白的三维结构。根据理化性质和功能特征,4E9O 是一种稳定的蛋白,具有亲水结构的性质。采用天然光敏剂对 4E9O 三维模型进行的对接研究显示出良好的结合亲和力。D8L 蛋白与 Rib 显示出最佳的对接评分(-7.6 kcal/mol),与 Cur(-7.0 kcal/mol)和 Qct(-7.5 kcal/mol)也显示出良好的对接评分。

结论

研究结果表明,所有三种光敏剂均符合 Lipinski 五规则的标准,且具有类药性。此外,所有测试的光敏剂均未显示出肝毒性和细胞毒性。总之,我们的研究发现姜黄素、槲皮素和核黄素能够与 D8L 蛋白有效相互作用,具有很强的结合亲和力。可以得出结论,使用这些天然光敏剂的 aPDT 可能被认为是猴痘病的辅助治疗方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ccfa/10275794/a97ad76ce00c/gr1_lrg.jpg

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