• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

GATS 标签系统与蛋白质分析的生物素标记方法兼容。

GATS tag system is compatible with biotin labelling methods for protein analysis.

机构信息

Division of Cell-Free Life Science, Proteo-Science Center, Ehime University, 3 Bunkyo-Cho, Matsuyama, Ehime, 790-8577, Japan.

Division of Malaria Research, Proteo-Science Center, 3 Bunkyo-Cho, Matsuyama, Ehime, 790-8577, Japan.

出版信息

Sci Rep. 2023 Jun 23;13(1):10243. doi: 10.1038/s41598-023-36858-y.

DOI:10.1038/s41598-023-36858-y
PMID:37353572
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10290147/
Abstract

Polypeptide tags and biotin labelling technologies are widely used for protein analyses in biochemistry and cell biology. However, many peptide tag epitopes contain lysine residues (or amino acids) that are masked after biotinylation. Here, we propose the GATS tag system without a lysine residue and with high sensitivity and low non-specific binding using a rabbit monoclonal antibody against Plasmodium falciparum glycosylphosphatidylinositol (GPI)-anchored micronemal antigen (PfGAMA). From 14 monoclonal clones, an Ra3 clone was selected as it recognized an epitope-TLSVGVQNTF-without a lysine residue; this antibody and epitope tag set was called the GATS tag system. Surface plasmon resonance analysis showed that the tag system had a high affinity of 8.71 × 10 M. GATS tag indicated a very low background with remarkably high sensitivity and specificity in immunoblotting using the lysates of mammalian cells. It also showed a high sensitivity for immunoprecipitation and immunostaining of cultured human cells. The tag system was highly sensitive in both biotin labelling methods for proteins using NHS-Sulfo-biotin and BioID (proximity-dependent biotin identification) in the human cells, as opposed to a commercially available tag system having lysine residues, which showed reduced sensitivity. These results showed that the GATS tag system is suitable for methods such as BioID involving labelling lysine residues.

摘要

多肽标签和生物素标记技术广泛应用于生物化学和细胞生物学中的蛋白质分析。然而,许多肽标签表位含有赖氨酸残基(或氨基酸),在生物素化后会被掩盖。在这里,我们提出了一种不含赖氨酸残基的 GATS 标签系统,该系统使用针对疟原虫糖基磷脂酰肌醇(GPI)锚定微线抗原(PfGAMA)的兔单克隆抗体具有高灵敏度和低非特异性结合。从 14 个单克隆克隆中,选择了 Ra3 克隆,因为它识别不含赖氨酸残基的表位-TLSVGVQNTF-;该抗体和表位标签集称为 GATS 标签系统。表面等离子体共振分析表明,该标签系统具有 8.71×10 M 的高亲和力。GATS 标签在使用哺乳动物细胞裂解物进行免疫印迹时具有非常低的背景、极高的灵敏度和特异性。它在培养的人类细胞的免疫沉淀和免疫染色中也显示出很高的灵敏度。与含有赖氨酸残基的商业标签系统相比,该标签系统在 NHS-Sulfo-biotin 和 BioID(邻近依赖性生物素鉴定)等用于蛋白质的生物素标记方法中具有很高的灵敏度。这些结果表明,GATS 标签系统适用于涉及标记赖氨酸残基的方法,如 BioID。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/0cd2e6447025/41598_2023_36858_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/74f92aea86bc/41598_2023_36858_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/93d7e651af48/41598_2023_36858_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/a5d4ad5eccfd/41598_2023_36858_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/ed344483088d/41598_2023_36858_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/4516041a7780/41598_2023_36858_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/0cd2e6447025/41598_2023_36858_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/74f92aea86bc/41598_2023_36858_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/93d7e651af48/41598_2023_36858_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/a5d4ad5eccfd/41598_2023_36858_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/ed344483088d/41598_2023_36858_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/4516041a7780/41598_2023_36858_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b2f1/10290147/0cd2e6447025/41598_2023_36858_Fig6_HTML.jpg

相似文献

1
GATS tag system is compatible with biotin labelling methods for protein analysis.GATS 标签系统与蛋白质分析的生物素标记方法兼容。
Sci Rep. 2023 Jun 23;13(1):10243. doi: 10.1038/s41598-023-36858-y.
2
Evaluation of two novel tag-based labelling technologies for site-specific modification of proteins.两种基于标签的新型蛋白质位点特异性修饰标记技术的评估。
Int J Biol Macromol. 2006 Aug 15;39(1-3):66-76. doi: 10.1016/j.ijbiomac.2006.01.012. Epub 2006 Feb 28.
3
AirID, a novel proximity biotinylation enzyme, for analysis of protein-protein interactions.空气 ID,一种新型的临近生物素化酶,用于分析蛋白质-蛋白质相互作用。
Elife. 2020 May 11;9:e54983. doi: 10.7554/eLife.54983.
4
AGIA Tag System Based on a High Affinity Rabbit Monoclonal Antibody against Human Dopamine Receptor D1 for Protein Analysis.基于抗人多巴胺受体D1的高亲和力兔单克隆抗体的AGIA标签系统用于蛋白质分析。
PLoS One. 2016 Jun 6;11(6):e0156716. doi: 10.1371/journal.pone.0156716. eCollection 2016.
5
How biotinylation can interfere with recognition: a surface plasmon resonance study of peptide-antibody interactions.生物素化如何干扰识别:肽-抗体相互作用的表面等离子体共振研究
J Immunol Methods. 2003 Mar 1;274(1-2):149-58. doi: 10.1016/s0022-1759(02)00517-3.
6
A simple method for labeling proteins and antibodies with biotin using the proximity biotinylation enzyme TurboID.使用邻近生物素化酶 TurboID 对蛋白质和抗体进行生物素标记的简单方法。
Biochem Biophys Res Commun. 2022 Feb 12;592:54-59. doi: 10.1016/j.bbrc.2021.12.109. Epub 2021 Dec 30.
7
Differential biotin labelling of the cell envelope proteins in lipopolysaccharidic diderm bacteria: Exploring the proteosurfaceome of Escherichia coli using sulfo-NHS-SS-biotin and sulfo-NHS-PEG4-bismannose-SS-biotin.脂双层型革兰氏阴性双菌的细胞外膜蛋白的生物素标记差异:利用磺基-NHS-SS-生物素和磺基-NHS-PEG4-双甘露糖基-SS-生物素探索大肠杆菌的蛋白质组表面组学。
J Proteomics. 2018 Jun 15;181:16-23. doi: 10.1016/j.jprot.2018.03.026. Epub 2018 Mar 30.
8
Identification of Proximity Interactors of Mammalian Nucleoid Proteins by BioID.通过生物识别技术鉴定哺乳动物类核蛋白的邻近相互作用蛋白
Methods Mol Biol. 2023;2615:153-172. doi: 10.1007/978-1-0716-2922-2_12.
9
Optimal use of tandem biotin and V5 tags in ChIP assays.染色质免疫沉淀实验中串联生物素和V5标签的优化使用
BMC Mol Biol. 2009 Feb 5;10:6. doi: 10.1186/1471-2199-10-6.
10
Non-radioactive labelling and immunoprecipitation analysis of leukocyte surface proteins using different methods of protein biotinylation.使用不同蛋白质生物素化方法对白细胞表面蛋白进行非放射性标记和免疫沉淀分析。
J Immunol Methods. 1994 Feb 10;168(2):209-18. doi: 10.1016/0022-1759(94)90057-4.

引用本文的文献

1
In-cell proximity target validation methods for heterobifunctional molecules with CRBN- or VHL-binder using AirID.使用AirID对具有CRBN或VHL结合剂的异双功能分子进行细胞内邻近靶点验证的方法
Commun Biol. 2025 Aug 30;8(1):1323. doi: 10.1038/s42003-025-08761-x.

本文引用的文献

1
Optimized Workflow for Enrichment and Identification of Biotinylated Peptides Using Tamavidin 2-REV for BioID and Cell Surface Proteomics.使用 Tamavidin 2-REV 进行 BioID 和细胞表面蛋白质组学的生物素化肽富集和鉴定的优化工作流程。
J Proteome Res. 2022 Sep 2;21(9):2094-2103. doi: 10.1021/acs.jproteome.2c00130. Epub 2022 Aug 17.
2
CF-PPiD technology based on cell-free protein array and proximity biotinylation enzyme for in vitro direct interactome analysis.基于无细胞蛋白质阵列和邻近生物素化酶的 CF-PPiD 技术用于体外直接互作组分析。
Sci Rep. 2022 Jun 22;12(1):10592. doi: 10.1038/s41598-022-14872-w.
3
A simple method for labeling proteins and antibodies with biotin using the proximity biotinylation enzyme TurboID.
使用邻近生物素化酶 TurboID 对蛋白质和抗体进行生物素标记的简单方法。
Biochem Biophys Res Commun. 2022 Feb 12;592:54-59. doi: 10.1016/j.bbrc.2021.12.109. Epub 2021 Dec 30.
4
A proximity biotinylation-based approach to identify protein-E3 ligase interactions induced by PROTACs and molecular glues.基于邻近生物素化的方法鉴定 PROTACs 和分子胶诱导的蛋白-E3 连接酶相互作用。
Nat Commun. 2022 Jan 10;13(1):183. doi: 10.1038/s41467-021-27818-z.
5
A proximity-dependent biotinylation map of a human cell.一种人类细胞的依赖邻近性的生物素标记图谱。
Nature. 2021 Jul;595(7865):120-124. doi: 10.1038/s41586-021-03592-2. Epub 2021 Jun 2.
6
Thalidomide and its metabolite 5-hydroxythalidomide induce teratogenicity via the cereblon neosubstrate PLZF.沙利度胺及其代谢产物 5-羟基沙利度胺通过 cereblon 新底物 PLZF 诱导致畸性。
EMBO J. 2021 Feb 15;40(4):e105375. doi: 10.15252/embj.2020105375. Epub 2021 Jan 20.
7
An APEX2 proximity ligation method for mapping interactions with the nuclear lamina.一种用于绘制与核层粘连蛋白相互作用的 APEX2 邻近连接方法。
J Cell Biol. 2021 Jan 4;220(1). doi: 10.1083/jcb.202002129.
8
Chemico-genetic discovery of astrocytic control of inhibition in vivo.体内星形胶质细胞抑制控制的化学生物学发现。
Nature. 2020 Dec;588(7837):296-302. doi: 10.1038/s41586-020-2926-0. Epub 2020 Nov 11.
9
Structural bases of IMiD selectivity that emerges by 5-hydroxythalidomide.5-羟色胺导致免疫调节药物(IMiD)选择性的结构基础。
Nat Commun. 2020 Sep 14;11(1):4578. doi: 10.1038/s41467-020-18488-4.
10
AirID, a novel proximity biotinylation enzyme, for analysis of protein-protein interactions.空气 ID,一种新型的临近生物素化酶,用于分析蛋白质-蛋白质相互作用。
Elife. 2020 May 11;9:e54983. doi: 10.7554/eLife.54983.