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凡纳滨对虾的丙酮酸激酶:基因结构及其对短期缺氧的响应。

The pyruvate kinase of the whiteleg shrimp Litopenaeus vannamei: Gene structure and responses to short term hypoxia.

机构信息

Centro de Investigación en Alimentación y Desarrollo, A.C., Carretera Gustavo Enrique Astiazarán Rosas, No. 46, Col. La Victoria, CP. 83304 Hermosillo, Sonora, Mexico.

Universidad de Sonora Unidad Regional Sur, Departamento de Ciencias Químico-Biológicas y Agropecuarias, Navojoa, Sonora CP. 85880, Mexico.

出版信息

Comp Biochem Physiol A Mol Integr Physiol. 2023 Sep;283:111468. doi: 10.1016/j.cbpa.2023.111468. Epub 2023 Jun 22.

Abstract

The shrimp Litopenaeus vannamei is the main farmed crustacean worldwide. This shrimp suffers environmental changes in oxygen availability that affect its energy metabolism. Pyruvate kinase (PK) catalyzes the last reaction of glycolysis and is key for the regulation of glycolysis and gluconeogenesis. There is ample knowledge about mammalian PK, but in crustaceans, the information is very scarce. In this study, we analyzed in silico the structures of the PK gene and protein. Also, the effects of hypoxia on gene expression, enzymatic activity, glucose, and lactate in hepatopancreas and muscle were analyzed. The PK gene is 15,103 bp and contains 11 exons and 10 introns, producing four mRNA variants by alternative splicing and named PK1, PK2, PK3 and PK4, that results in two proteins with longer C-terminus and two with a 12 bp insertion. The promoter contains putative binding sites for transcription factors (TF) that are typically involved in stress responses. The deduced amino acid sequences contain the classic domains, binding sites for allosteric effectors and potential reversible phosphorylation residues. Protein modeling indicates a homotetramer with highly conserved structure. The effect of hypoxia for 6 and 12 h showed tissue-specific patterns, with higher expression, enzyme activity and lactate in muscle, but higher glucose in hepatopancreas. Changes in response to hypoxia were detected at 12 h in expression with induction in muscle and reduction in hepatopancreas, while enzyme activity was maintained, and glucose and lactate decreased. These results show rapid changes in expression and metabolites, while enzyme activity was maintained to cope with short-term hypoxia.

摘要

南美白对虾是世界上主要的养殖甲壳类动物。这种虾会受到氧气供应变化的环境影响,从而影响其能量代谢。丙酮酸激酶(PK)催化糖酵解的最后一个反应,是糖酵解和糖异生调节的关键。人们对哺乳动物 PK 有充分的了解,但在甲壳类动物中,相关信息非常匮乏。在本研究中,我们通过计算机分析了 PK 基因和蛋白质的结构。此外,还分析了低氧对肝胰腺和肌肉中基因表达、酶活性、葡萄糖和乳酸的影响。PK 基因长 15103bp,包含 11 个外显子和 10 个内含子,通过选择性剪接产生四种 mRNA 变体,分别命名为 PK1、PK2、PK3 和 PK4,从而产生两种具有更长 C 末端的蛋白质和两种具有 12bp 插入的蛋白质。启动子包含转录因子(TF)的假定结合位点,这些 TF 通常参与应激反应。推导的氨基酸序列包含经典结构域、变构效应物结合位点和潜在的可逆磷酸化残基。蛋白质建模表明,PK 是一个具有高度保守结构的同源四聚体。低氧处理 6 和 12 小时后,显示出组织特异性模式,肌肉中的表达、酶活性和乳酸水平较高,但肝胰腺中的葡萄糖水平较高。在 12 小时的低氧反应中,肌肉中的表达增加,肝胰腺中的表达减少,而酶活性保持不变,葡萄糖和乳酸减少。这些结果表明,在应对短期低氧时,表达和代谢物迅速发生变化,而酶活性保持不变。

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