Imaging Core Facility, Biocenter, University of Würzburg, Würzburg, Germany.
Department of Biological Sciences, University of Denver, Denver, CO, USA.
Methods Mol Biol. 2023;2692:337-360. doi: 10.1007/978-1-0716-3338-0_22.
The nematode Caenorhabditis elegans offers many experimental advantages to study conserved mechanisms of phagocytosis and phagocytic clearance. These include the stereotyped timing of phagocytic events in vivo for time-lapse imaging, the availability of transgenic reporters labeling molecules involved in different steps of phagocytosis, and the transparency of the animal for fluorescence imaging. Further, the ease of forward and reverse genetics in C. elegans has enabled many of the initial discoveries of proteins involved in phagocytic clearance. In this chapter, we focus on phagocytosis by the large undifferentiated blastomeres of C. elegans embryos, which engulf and eliminate diverse phagocytic cargo from the corpse of the second polar body to cytokinetic midbody remnants. We describe the use of fluorescent time-lapse imaging to observe the distinct steps of phagocytic clearance and methods to normalize this process to distinguish defects in mutant strains. These approaches have enabled us to reveal new insights from the initial signaling to induce phagocytosis up until the final resolution of phagocytic cargo in phagolysosomes.
秀丽隐杆线虫为研究吞噬作用和吞噬清除的保守机制提供了许多实验优势。这些优势包括在活体中进行时间 lapse 成像时吞噬事件的刻板定时、可用于标记吞噬作用不同步骤中涉及的分子的转基因报告器,以及动物的荧光成像透明性。此外,秀丽隐杆线虫正向和反向遗传学的简便性使许多参与吞噬清除的蛋白质的最初发现成为可能。在本章中,我们专注于秀丽隐杆线虫胚胎的大未分化卵裂球的吞噬作用,这些卵裂球吞噬并清除来自第二个极体尸体的各种吞噬性 cargo,直到胞质分裂中期体残留物。我们描述了使用荧光时间 lapse 成像观察吞噬清除的不同步骤的方法,以及对这个过程进行标准化以区分突变株缺陷的方法。这些方法使我们能够揭示从最初的诱导吞噬作用的信号到吞噬体中的吞噬性 cargo 最终被清除的新见解。