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使用金纳米颗粒探针比色法检测铜绿假单胞菌

Colorimetric bacteria sensing of Pseudomonas aeruginosa using gold nanoparticle probes.

作者信息

Mousivand Zahra, Haddadi Fatemeh, Kamaladini Hossein

机构信息

Department of Biology, Faculty of Sciences, University of Zabol, Sistan and Baluchestan, Zabol, 98613-35856, Iran.

出版信息

J Genet Eng Biotechnol. 2023 Jun 27;21(1):72. doi: 10.1186/s43141-023-00527-4.

Abstract

BACKGROUND

Due to the advantages of molecular methods over biochemical methods, the use of molecular methods for diagnosing nosocomial infections such as Pseudomonas can be an appropriate and rapid way to choose the right diagnosis and treatment of infection and prevent further complications caused by the infection. The present article provides a description of the development of a nanoparticle-based detection technique for sensitive and specific deoxyribonucleic acid-based diagnostic of Pseudomonas aeruginosa. Specific thiolated oligonucleotide probes for one of the hypervariable regions of the 16S rDNA gene were designed and applied for colorimetric detection of the bacteria.

RESULTS

The results of gold nanoprobe-nucleic sequence amplification indicated the probe attached to gold nanoparticles in the presence of the target deoxyribonucleic acid. It caused aggregation of gold nanoparticles in the form of connected networks resulting in color change and indicating the presence of the target molecule in the sample, which could be observed by the naked eye. In addition, the wavelength of gold nanoparticles changed from 524 to 558 nm. Multiplex polymerase chain reactions were performed using four specific genes of Pseudomonas aeruginosa (oprL, oprI, toxA, and 16S rDNA). The sensitivity and specificity of the two techniques were assessed. According to the observations, the specificity of both techniques was 100%, and the sensitivity was 0.5 ng/μL and 0.01 ng/μL of genomic deoxyribonucleic acid for multiplex polymerase chain reaction and colorimetric assay, respectively.

CONCLUSIONS

The sensitivity of colorimetric detection was about 50 times higher than the polymerase chain reaction using the 16SrDNA gene. The results of our study proved to be highly specific with potential use for early detection of Pseudomonas aeruginosa.

摘要

背景

由于分子方法相对于生化方法具有优势,使用分子方法诊断医院感染(如假单胞菌感染)可能是选择正确的感染诊断和治疗方法并预防感染引起的进一步并发症的合适且快速的途径。本文描述了一种基于纳米颗粒的检测技术的开发,用于对铜绿假单胞菌进行灵敏且特异的基于脱氧核糖核酸的诊断。设计了针对16S rDNA基因高变区之一的特异性硫醇化寡核苷酸探针,并将其应用于细菌的比色检测。

结果

金纳米探针 - 核酸序列扩增结果表明,在靶脱氧核糖核酸存在的情况下,探针附着于金纳米颗粒。这导致金纳米颗粒以连接网络的形式聚集,从而引起颜色变化,表明样品中存在靶分子,肉眼即可观察到。此外,金纳米颗粒的波长从524 nm变为558 nm。使用铜绿假单胞菌的四个特定基因(oprL、oprI、toxA和16S rDNA)进行多重聚合酶链反应。评估了这两种技术的灵敏度和特异性。根据观察结果,两种技术的特异性均为100%,多重聚合酶链反应和比色测定法对基因组脱氧核糖核酸的灵敏度分别为0.5 ng/μL和0.01 ng/μL。

结论

比色检测的灵敏度比使用16SrDNA基因的聚合酶链反应高约50倍。我们的研究结果证明具有高度特异性,有潜力用于早期检测铜绿假单胞菌。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/779e/10299975/6d232646072a/43141_2023_527_Fig1_HTML.jpg

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