Microbial Cellular and Molecular Biology Department, College of Natural and Computational Sciences, Addis Ababa University, Addis Ababa, Ethiopia.
Department of Diagnostic Laboratory, Tikur Anbessa Specialized Hospital, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia.
PLoS One. 2023 Jun 27;18(6):e0287453. doi: 10.1371/journal.pone.0287453. eCollection 2023.
Bloodstream infection due to beta-lactamase and carbapenemase-producing gram-negative bacteria poses a substantial challenge to the effectiveness of antimicrobial treatments. Therefore, this study aimed to investigate the magnitude of beta-lactamase, carbapenemase-producing gram-negative bacteria, and associated risk factors of bloodstream infections in patients at a tertiary care hospital, in Addis Ababa, Ethiopia.
An institutional-based cross-sectional study was conducted with convenience sampling techniques from September 2018 to March 2019. Blood cultures were analyzed from 1486 bloodstream infection suspected patients across all age groups. The blood sample was collected using two BacT/ALERT blood culture bottles for each patient. Gram stain, colony characteristics, and conventional biochemical tests were used to classify the gram-negative bacteria at the species level. Antimicrobial susceptibility testing was carried out to screen beta-lactam and carbapenem drug-resistant bacteria. The E-test was conducted for extended-spectrum-beta-lactamase and AmpC-beta-lactamase-producers. A modified and EDTA-modified carbapenem inactivation method was conducted for carbapenemase and metallo-beta-lactamases producers. Data collected using structured questionnaires and medical records were reviewed, encoded, and cleaned using EpiData V3.1. software. The cleaned data were exported and analyzed using SPSS version 24 software. Descriptive statistics and multivariate logistic registration models were used to describe and assess factors associated with acquiring drug-resistant bacteria infection. A p-value <0.05 was considered statistically significant.
Among 1486 samples, 231 gram-negative bacteria were identified; of these, 195(84.4%) produce drug-hydrolyzing enzymes, and 31(13.4%) produce more than one drug-hydrolyzing enzyme. We found 54.0% and 25.7% of the gram-negative bacteria to be extended-spectrum-beta-lactamase and carbapenemase-producing, respectively. The extended-spectrum-beta-lactamase plus AmpC-beta-lactamase-producing bacteria account for 6.9%. Among the different isolates Klebsiella pneumonia 83(36.7%) was the highest drug-hydrolyzing enzyme-producing bacteria. Acinetobacter spp 25(53.2%) was the most carbapenemase producer. Extended-spectrum-beta-lactamase and carbapenemase-producing bacteria were high in this study. A significant association between age groups and extended-spectrum-beta-lactamase producer bacterial infection was seen, with a high prevalence in neonates (p = <0.001). Carbapenemase showed a significant association with patients admitted to the intensive care unit (p = 0.008), general surgery (p = 0.001), and surgical intensive care unit (p = 0.007) departments. Delivery of neonates by caesarean section, and insertion of medical instruments into the body were exposing factors for carbapenem-resistant bacterial infection. Chronic illnesses were associated with an extended-spectrum-beta-lactamase-producing bacterial infection. Klebsiella pneumonia and Acinetobacter species showed the greatest rates of extensively drug-resistant (37.3%) and pan-drug-resistance (76.5%), respectively. According to the results of this study, the pan-drug-resistance prevalence was found to be alarming.
Gram-negative bacteria were the main pathogens responsible for drug-resistant bloodstream infections. A high percentage of extended-spectrum-beta-lactamase and carbapenemase-producer bacteria were found in this study. Neonates were more susceptible to extended-spectrum-beta-lactamase and AmpC-beta-lactamase-producer bacteria. Patients in general surgery, caesarean section delivery, and intensive care unit were more susceptible to carbapenemase-producer bacteria. The suction machines, intravenous lines, and drainage tubes play an important role in the transmission of carbapenemase and metallo-beta-lactamase-producing bacteria. The hospital management and other stakeholders should work on infection prevention protocol implementation. Moreover, special attention should be given to all types of Klebsiella pneumoniae and pan-drug resistance Acinetobacter spp transmission dynamics, drug resistance genes, and virulence factors.
产β-内酰胺酶和碳青霉烯酶的革兰氏阴性菌引起的血流感染对抗菌治疗的效果构成了重大挑战。因此,本研究旨在调查埃塞俄比亚亚的斯亚贝巴一家三级保健医院革兰氏阴性血流感染患者中产β-内酰胺酶、碳青霉烯酶的革兰氏阴性细菌的流行程度以及相关危险因素。
本研究为 2018 年 9 月至 2019 年 3 月进行的一项基于机构的横断面研究,采用便利抽样技术。对所有年龄段疑似血流感染患者的 1486 份血培养样本进行分析。每位患者采集两个 BacT/ALERT 血培养瓶的血液样本。革兰氏染色、菌落特征和常规生化试验用于对革兰氏阴性细菌进行种水平分类。进行抗生素敏感性试验以筛选β-内酰胺类和碳青霉烯类耐药菌。使用 E 试验对产超广谱β-内酰胺酶和 AmpC-β-内酰胺酶的细菌进行检测。对碳青霉烯酶和金属β-内酰胺酶的产酶菌进行改良和 EDTA 修饰的碳青霉烯灭活法检测。使用结构化问卷和病历收集数据,使用 EpiData V3.1 软件进行回顾、编码和清理。使用 SPSS 24 软件导出和分析清理后的数据。使用描述性统计和多变量逻辑回归模型来描述和评估与获得耐药菌感染相关的因素。p 值<0.05 被认为具有统计学意义。
在 1486 份样本中,鉴定出 231 株革兰氏阴性细菌;其中 195 株(84.4%)产生药物水解酶,31 株(13.4%)产生一种以上的药物水解酶。我们发现 54.0%和 25.7%的革兰氏阴性细菌分别为产超广谱β-内酰胺酶和碳青霉烯酶的细菌。产超广谱β-内酰胺酶和 AmpC-β-内酰胺酶的细菌占 6.9%。在不同的分离株中,肺炎克雷伯菌(Klebsiella pneumonia)83 株(36.7%)是产生药物水解酶最多的细菌。鲍曼不动杆菌(Acinetobacter spp)25 株(53.2%)是产碳青霉烯酶最多的细菌。本研究中,产超广谱β-内酰胺酶和碳青霉烯酶的细菌比例较高。年龄组与产超广谱β-内酰胺酶细菌感染之间存在显著关联,新生儿的患病率较高(p<0.001)。碳青霉烯酶与重症监护病房(p=0.008)、普通外科(p=0.001)和外科重症监护病房(p=0.007)部门的患者显著相关。通过剖宫产分娩新生儿和将医疗器械插入体内是导致碳青霉烯类耐药菌感染的暴露因素。慢性疾病与产超广谱β-内酰胺酶细菌感染相关。肺炎克雷伯菌(Klebsiella pneumonia)和鲍曼不动杆菌(Acinetobacter species)的广泛耐药率(37.3%)和全耐药率(76.5%)最高。根据本研究的结果,发现全耐药率令人震惊。
革兰氏阴性菌是引起耐药性血流感染的主要病原体。本研究中发现了大量产超广谱β-内酰胺酶和碳青霉烯酶的细菌。新生儿更容易感染产超广谱β-内酰胺酶和 AmpC-β-内酰胺酶的细菌。普通外科、剖宫产分娩和重症监护病房的患者更容易感染产碳青霉烯酶的细菌。抽吸机、静脉输液和引流管在碳青霉烯酶和金属β-内酰胺酶产酶菌的传播中起着重要作用。医院管理和其他利益相关者应致力于实施感染预防方案。此外,应特别关注所有类型的肺炎克雷伯菌和泛耐药鲍曼不动杆菌的传播动态、耐药基因和毒力因子。