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一种从头设计的三聚体金属蛋白作为乙酰辅酶 A 合酶的 Ni 模型。

A De Novo Designed Trimeric Metalloprotein as a Ni Model of the Acetyl-CoA Synthase.

机构信息

Department of Chemistry and Biochemistry, University of Mississippi, Coulter Hall, Oxford, MS 38677, USA.

出版信息

Int J Mol Sci. 2023 Jun 19;24(12):10317. doi: 10.3390/ijms241210317.

DOI:10.3390/ijms241210317
PMID:37373464
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10299331/
Abstract

We present a Ni site model of acetyl coenzyme-A synthase (ACS) within a de novo-designed trimer peptide that self-assembles to produce a homoleptic Ni(Cys) binding motif. Spectroscopic and kinetic studies of ligand binding demonstrate that Ni binding stabilizes the peptide assembly and produces a terminal Ni-CO complex. When the CO-bound state is reacted with a methyl donor, a new species is quickly produced with new spectral features. While the metal-bound CO is albeit unactivated, the presence of the methyl donor produces an activated metal-CO complex. Selective outer sphere steric modifications demonstrate that the physical properties of the ligand-bound states are altered differently depending on the location of the steric modification above or below the Ni site.

摘要

我们提出了一个位于从头设计的三聚体肽内的乙酰辅酶 A 合酶(ACS)的 Ni 位模型,该三聚体肽自身组装以产生同配位的 Ni(Cys) 结合基序。配体结合的光谱和动力学研究表明,Ni 结合稳定了肽组装并产生末端 Ni-CO 络合物。当 CO 结合态与供甲基体反应时,会迅速产生具有新光谱特征的新物种。虽然金属结合的 CO 没有被激活,但供甲基体的存在产生了一个被激活的金属-CO 络合物。选择性的外部球体空间位阻修饰表明,配体结合态的物理性质根据位阻修饰位于 Ni 位上方或下方的位置而不同地被改变。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/564b060c422d/ijms-24-10317-g007.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/2a1e34eaac9e/ijms-24-10317-sch001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/dbd2944f890d/ijms-24-10317-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/564b060c422d/ijms-24-10317-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/818982afc959/ijms-24-10317-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/cd0fab24afb6/ijms-24-10317-g002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/55801407ef6e/ijms-24-10317-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/2a1e34eaac9e/ijms-24-10317-sch001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/dbd2944f890d/ijms-24-10317-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/abe5/10299331/564b060c422d/ijms-24-10317-g007.jpg

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