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重组人发动蛋白1及其N-BAR结构域的纯化

Purification of Recombinant Human Amphiphysin 1 and its N-BAR Domain.

作者信息

Mondal Samsuzzoha, James Honey Priya, Milano Francesco, Jin Rui, Baumgart Tobias

机构信息

Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania, United States.

出版信息

Bio Protoc. 2023 Jun 20;13(12):e4699. doi: 10.21769/BioProtoc.4699.

DOI:10.21769/BioProtoc.4699
PMID:37397795
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10308189/
Abstract

Bin/Amphiphysin/Rvs (BAR) proteins are known as classical membrane curvature generators during endocytosis. Amphiphysin, a member of the N-BAR sub-family of proteins that contain a characteristic amphipathic sequence at the N-terminus of the BAR domain, is involved in clathrin-mediated endocytosis. Full-length amphiphysin contains a ~ 400 amino acid long disordered linker connecting the N-BAR domain and a C-terminal Src homology 3 (SH3) domain. We express and purify recombinant amphiphysin and its N-BAR domain along with an N-terminal glutathione-S-transferase (GST) tag. The GST tag allows extraction of the protein of interest using affinity chromatography and is removed in the subsequent protease treatment and ion-exchange chromatography steps. In the case of the N-BAR domain, cleavage of the GST tag was found to cause precipitation. This issue can be minimized by adding glycerol to the protein purification buffers. In the final step, size exclusion chromatography removes any potential oligomeric species. This protocol has also been successfully used to purify other N-BAR proteins, such as endophilin, Bin1, and their corresponding BAR domains. Graphical overview.

摘要

Bin/Amphiphysin/Rvs(BAR)蛋白是已知的内吞作用过程中的经典膜曲率生成器。发动蛋白是N-BAR亚家族蛋白的成员,在BAR结构域的N端含有一个特征性的两亲序列,参与网格蛋白介导的内吞作用。全长发动蛋白包含一个约400个氨基酸长的无序连接子,连接N-BAR结构域和C端Src同源3(SH3)结构域。我们表达并纯化了重组发动蛋白及其N-BAR结构域,并带有N端谷胱甘肽-S-转移酶(GST)标签。GST标签允许使用亲和色谱法提取目标蛋白,并在随后的蛋白酶处理和离子交换色谱步骤中去除。对于N-BAR结构域,发现GST标签的切割会导致沉淀。通过向蛋白质纯化缓冲液中添加甘油,可以将这个问题最小化。在最后一步中,尺寸排阻色谱法去除任何潜在的寡聚体。该方案也已成功用于纯化其他N-BAR蛋白,如内吞蛋白、Bin1及其相应的BAR结构域。图形概述。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/704f/10308189/cb90b8e6f041/BioProtoc-13-12-4699-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/704f/10308189/59ebecac8a86/BioProtoc-13-12-4699-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/704f/10308189/cb90b8e6f041/BioProtoc-13-12-4699-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/704f/10308189/59ebecac8a86/BioProtoc-13-12-4699-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/704f/10308189/cb90b8e6f041/BioProtoc-13-12-4699-g002.jpg

相似文献

1
Purification of Recombinant Human Amphiphysin 1 and its N-BAR Domain.重组人发动蛋白1及其N-BAR结构域的纯化
Bio Protoc. 2023 Jun 20;13(12):e4699. doi: 10.21769/BioProtoc.4699.
2
Single point mutation in Bin/Amphiphysin/Rvs (BAR) sequence of endophilin impairs dimerization, membrane shaping, and Src homology 3 domain-mediated partnership.网格蛋白/接头蛋白/肌动蛋白结合蛋白(Bin/Amphiphysin/Rvs,BAR)结构域中的单点突变破坏了二聚化、膜塑形以及Src 同源 3 结构域介导的结合作用。
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3
Kinetics of Src homology 3 domain association with the proline-rich domain of dynamins: specificity, occlusion, and the effects of phosphorylation.Src同源3结构域与发动蛋白富含脯氨酸结构域结合的动力学:特异性、封闭作用及磷酸化的影响
J Biol Chem. 2005 Jun 17;280(24):23147-56. doi: 10.1074/jbc.M501745200. Epub 2005 Apr 17.
4
Roles of amphipathic helices and the bin/amphiphysin/rvs (BAR) domain of endophilin in membrane curvature generation.内收蛋白的两亲性螺旋和 bin/amphiphysin/rvs (BAR) 结构域在膜曲率生成中的作用。
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Dual role of BAR domain-containing proteins in regulating vesicle release catalyzed by the GTPase, dynamin-2.BAR 结构域蛋白在调节 GTP 酶 dynamin-2 催化的囊泡释放中的双重作用。
J Biol Chem. 2013 Aug 30;288(35):25119-25128. doi: 10.1074/jbc.M113.490474. Epub 2013 Jul 16.
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The Bin/amphiphysin/Rvs (BAR) domain protein endophilin B2 interacts with plectin and controls perinuclear cytoskeletal architecture.Bin/ amphiphysin/ Rvs (BAR) 结构域蛋白内收蛋白 B2 与网蛋白相互作用,控制核周细胞骨架结构。
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The phospho-regulated amphiphysin/endophilin interaction is required for synaptic vesicle endocytosis.磷酸化调节的 amphiphysin/endophilin 相互作用对于突触囊泡内吞作用是必需的。
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Cooperative recruitment of dynamin and BIN/amphiphysin/Rvs (BAR) domain-containing proteins leads to GTP-dependent membrane scission.网格蛋白/接头蛋白复集体与动力蛋白的协同募集导致 GTP 依赖的膜断裂。
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Unfolding Mechanisms and Conformational Stability of the Dimeric Endophilin N-BAR Domain.二聚体内吞蛋白N-BAR结构域的展开机制与构象稳定性
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10
SH3 domain-dependent interactions of endophilin with amphiphysin.内吞蛋白与发动蛋白通过SH3结构域依赖性相互作用。
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本文引用的文献

1
Multivalent interactions between molecular components involved in fast endophilin mediated endocytosis drive protein phase separation.多价相互作用在快速内吞作用中涉及的分子成分之间驱动蛋白质相分离。
Nat Commun. 2022 Aug 26;13(1):5017. doi: 10.1038/s41467-022-32529-0.
2
Endophilin A1 induces different membrane shapes using a conformational switch that is regulated by phosphorylation.内啡肽 A1 通过构象开关诱导不同的膜形状,该构象开关受磷酸化调节。
Proc Natl Acad Sci U S A. 2014 May 13;111(19):6982-7. doi: 10.1073/pnas.1402233111. Epub 2014 Apr 28.
3
Kinetics of endophilin N-BAR domain dimerization and membrane interactions.
内啡啉 N-BAR 结构域二聚化和膜相互作用的动力学。
J Biol Chem. 2013 May 3;288(18):12533-43. doi: 10.1074/jbc.M112.435511. Epub 2013 Mar 12.
4
Recruitment of endophilin to clathrin-coated pit necks is required for efficient vesicle uncoating after fission.网格蛋白包被凹陷颈部的内吞素募集对于分裂后囊泡的有效去被化是必需的。
Neuron. 2011 Nov 17;72(4):587-601. doi: 10.1016/j.neuron.2011.08.029.
5
Mechanisms of protein stabilization and prevention of protein aggregation by glycerol.甘油对蛋白质的稳定作用及防止蛋白质聚集的机制。
Biochemistry. 2009 Nov 24;48(46):11084-96. doi: 10.1021/bi900649t.
6
The BAR domain superfamily: membrane-molding macromolecules.BAR结构域超家族:塑造膜的大分子。
Cell. 2009 Apr 17;137(2):191-6. doi: 10.1016/j.cell.2009.04.010.
7
Mechanism of endophilin N-BAR domain-mediated membrane curvature.内吞蛋白N-BAR结构域介导膜曲率的机制。
EMBO J. 2006 Jun 21;25(12):2898-910. doi: 10.1038/sj.emboj.7601174. Epub 2006 Jun 8.
8
Endophilin and CtBP/BARS are not acyl transferases in endocytosis or Golgi fission.内吞蛋白和CtBP/BARS在胞吞作用或高尔基体分裂过程中并非酰基转移酶。
Nature. 2005 Dec 1;438(7068):675-8. doi: 10.1038/nature04136.
9
Functional partnership between amphiphysin and dynamin in clathrin-mediated endocytosis.网格蛋白介导的内吞作用中发动蛋白与 amphiphysin 之间的功能协作关系。
Nat Cell Biol. 1999 May;1(1):33-9. doi: 10.1038/9004.
10
The SH3p4/Sh3p8/SH3p13 protein family: binding partners for synaptojanin and dynamin via a Grb2-like Src homology 3 domain.SH3p4/Sh3p8/SH3p13蛋白家族:通过类Grb2的Src同源3结构域与突触素和发动蛋白结合的蛋白伴侣。
Proc Natl Acad Sci U S A. 1997 Aug 5;94(16):8569-74. doi: 10.1073/pnas.94.16.8569.