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双级核酸循环扩增组装超支化 DNA 纳米结构,构建新型等离子体比色生物传感方法。

Dual cascade nucleic acid recycling-amplified assembly of hyperbranched DNA nanostructures to construct a novel plasmonic colorimetric biosensing method.

机构信息

Hubei Key Laboratory of Pollutant Analysis & Reuse Technology, College of Chemistry and Chemical Engineering, Hubei Normal University, Huangshi 435002, China.

Daye Public Inspection and Test Central, Daye 435100, China.

出版信息

Analyst. 2023 Jul 26;148(15):3632-3640. doi: 10.1039/d3an00689a.

Abstract

The plasmonic colorimetric biosensors are very favorable for the on-site testing and naked-eye screening of analytes from real samples, but how to realize their highly sensitive assays with simple manipulations is still a great challenge. Herein we designed a target-triggered dual cascade nucleic acid recycling strategy to amplify the assembly of a hyperbranched DNA nanostructure and thus developed a novel kanamycin colorimetric biosensing method. The first cycle arising from the aptamer recognition-triggered strand displacement reaction and its cascade cycle constructed on the catalytic reaction of two nucleases could release an output DNA to trigger the assembly of the DNA nanostructure. Based on the high capture of alkaline phosphatase at this DNA nanostructure to induce the localized surface plasmon resonance change of gold nanobipyramids (Au NBPs), an ultrasensitive colorimetric signal transduction strategy was constructed. Through the measurement of the shift of the characteristic absorption wavelength of Au NBPs, a very wide linear range from 10 fg mL to 1 ng mL and a very low detection limit of 1.4 fg mL were obtained. Meanwhile, the obvious multicolor change of Au NBPs could be used for the visual semi-quantitative analysis of Kana residues. The whole homogeneous assay process well simplified the manipulation and also ensured the excellent repeatability. These excellent performances determine the great potential of the method for future applications.

摘要

等离子体比色生物传感器非常有利于现场测试和对来自实际样品的分析物进行肉眼筛选,但如何通过简单的操作实现其高灵敏度分析仍然是一个巨大的挑战。在此,我们设计了一种靶触发的双重级联核酸循环策略来放大超支化 DNA 纳米结构的组装,从而开发了一种新型卡那霉素比色生物传感方法。第一个循环源于适体识别触发的链置换反应及其在两种核酸酶的催化反应上构建的级联循环,可以释放输出 DNA 以触发 DNA 纳米结构的组装。基于在这种 DNA 纳米结构上碱性磷酸酶的高捕获以诱导金纳米双锥体 (Au NBPs) 的局域表面等离子体共振变化,构建了一种超灵敏的比色信号转导策略。通过测量 Au NBPs 的特征吸收波长的位移,可以获得从 10 fg mL 到 1 ng mL 的非常宽的线性范围和非常低的检测限 1.4 fg mL。同时,Au NBPs 的明显多色变化可用于 Kana 残留的可视化半定量分析。整个均相分析过程大大简化了操作,并且还确保了出色的重复性。这些优异的性能决定了该方法在未来应用中的巨大潜力。

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