• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用转化和结构疫苗学方法设计一种针对小细胞肺癌 NOL4 自身抗原的多表位疫苗。

Translational and structural vaccinomics approach to design a multi-epitope vaccine against NOL4 autologous antigen of small cell lung cancer.

机构信息

Amity Institute of Microbial Technology, Amity University Uttar Pradesh, Noida, India.

Amity Institute of Biotechnology, Amity University Uttar Pradesh, Noida, India.

出版信息

Immunol Res. 2023 Dec;71(6):909-928. doi: 10.1007/s12026-023-09404-1. Epub 2023 Jul 6.

DOI:10.1007/s12026-023-09404-1
PMID:37410306
Abstract

Small cell lung cancer (SCLC) is one of the most common cancers and it is the sixth common cause for cancer-related deaths. The high plasticity and metastasis have been a major challenge for humanity to treat the disease. Hence, a vaccine for SCLC has become an urgent need of the hour due to public health concern. Implementation of immunoinformatics technique is one of the best way to find a suitable vaccine candidate. Immunoinformatics tools can be used to overcome the limitations and difficulties of traditional vaccinological techniques. Multi-epitope cancer vaccines have become a next-generation technique in vaccinology which can be used to stimulate more potent immune response against a particular antigen by eliminating undesirable molecules. In this study, we used multiple computational and immunoinformatics approach to design a novel multi-epitope vaccine for small cell lung cancer. Nucleolar protein 4 (NOL4) is an autologous cancer-testis antigen overexpressed in SCLC cells. Seventy-five percent humoral immunity have been identified for this particular antigen. In this study, we mapped immunogenic cytotoxic T lymphocyte, helper T lymphocyte, and interferon-gamma epitopes present in NOL4 antigen and designed a multi-epitope-based vaccine using the predicted epitopes. The designed vaccine was antigenic, non-allergenic, and non-toxic with 100% applicability on human population. The chimeric vaccine construct showed stable and significant interaction with endosomal and plasmalemmal toll-like receptors in molecular docking and protein-peptide interaction analysis, thus assuring a strong potent immune response against the vaccine upon administration. Therefore, these preliminary results can be used to carry out further experimental investigations.

摘要

小细胞肺癌(SCLC)是最常见的癌症之一,也是癌症相关死亡的第六大常见原因。高可塑性和转移已经成为人类治疗这种疾病的主要挑战。因此,由于公共卫生的关注,SCLC 的疫苗已成为当务之急。免疫信息学技术的实施是寻找合适疫苗候选物的最佳方法之一。免疫信息学工具可用于克服传统疫苗技术的局限性和困难。多表位癌症疫苗已成为疫苗学中的下一代技术,可通过消除不良分子来刺激针对特定抗原的更有效免疫反应。在这项研究中,我们使用了多种计算和免疫信息学方法来设计一种用于小细胞肺癌的新型多表位疫苗。核仁蛋白 4(NOL4)是一种在 SCLC 细胞中过度表达的自体癌症睾丸抗原。已经鉴定出针对该特定抗原的 75%的体液免疫。在这项研究中,我们对 NOL4 抗原中存在的免疫原性细胞毒性 T 淋巴细胞、辅助 T 淋巴细胞和干扰素-γ表位进行了定位,并使用预测的表位设计了一种多表位疫苗。设计的疫苗具有抗原性、非变应原性和无毒副作用,在人类中的适用性为 100%。嵌合疫苗构建体在分子对接和蛋白-肽相互作用分析中显示出与内体和质膜 Toll 样受体的稳定和显著相互作用,从而确保在给药后对疫苗产生强烈有效的免疫反应。因此,这些初步结果可用于进一步的实验研究。

相似文献

1
Translational and structural vaccinomics approach to design a multi-epitope vaccine against NOL4 autologous antigen of small cell lung cancer.用转化和结构疫苗学方法设计一种针对小细胞肺癌 NOL4 自身抗原的多表位疫苗。
Immunol Res. 2023 Dec;71(6):909-928. doi: 10.1007/s12026-023-09404-1. Epub 2023 Jul 6.
2
Design of multi-epitope based vaccine against a subtractive proteomics and reverse vaccinology based immunoinformatics approach.基于消减蛋白质组学和反向疫苗学的免疫信息学方法设计针对[疾病名称未提及]的多表位疫苗。 (注:原文中“against”后缺少具体针对的疾病等对象,翻译时根据语境补充了“[疾病名称未提及]”)
J Biomol Struct Dyn. 2023;41(23):14116-14134. doi: 10.1080/07391102.2023.2178511. Epub 2023 Feb 12.
3
Employing an immunoinformatics approach revealed potent multi-epitope based subunit vaccine for lymphocytic choriomeningitis virus.采用免疫信息学方法,揭示了针对淋巴细胞脉络丛脑膜炎病毒的有效多表位亚单位疫苗。
J Infect Public Health. 2023 Feb;16(2):214-232. doi: 10.1016/j.jiph.2022.12.023. Epub 2022 Dec 31.
4
Exploring the cancer-testis antigen BORIS to design a novel multi-epitope vaccine against breast cancer based on immunoinformatics approaches.基于免疫信息学方法探索癌症睾丸抗原 BORIS 以设计针对乳腺癌的新型多表位疫苗。
J Biomol Struct Dyn. 2022 Sep;40(14):6363-6380. doi: 10.1080/07391102.2021.1883111. Epub 2021 Feb 18.
5
Design of a multi-epitope vaccine against six Nocardia species based on reverse vaccinology combined with immunoinformatics.基于反向疫苗学和免疫信息学的针对六种诺卡氏菌的多表位疫苗设计。
Front Immunol. 2023 Feb 2;14:1100188. doi: 10.3389/fimmu.2023.1100188. eCollection 2023.
6
Immunoinformatics design of multivalent epitope vaccine against monkeypox virus and its variants using membrane-bound, enveloped, and extracellular proteins as targets.针对猴痘病毒及其变体的多价表位疫苗的免疫信息学设计,使用膜结合、包膜和细胞外蛋白作为靶标。
Front Immunol. 2023 Jan 26;14:1091941. doi: 10.3389/fimmu.2023.1091941. eCollection 2023.
7
Development a multi-epitope driven subunit vaccine for immune response reinforcement against Serogroup B of Neisseria meningitidis using comprehensive immunoinformatics approaches.采用综合免疫信息学方法,开发针对脑膜炎奈瑟菌 B 群的多表位驱动亚单位疫苗以增强免疫应答。
Infect Genet Evol. 2019 Nov;75:103992. doi: 10.1016/j.meegid.2019.103992. Epub 2019 Aug 5.
8
Immunoinformatics Design of Multi-Epitope Peptide-Based Vaccine Against Using Transmembrane Proteins as a Target.基于跨膜蛋白的多表位肽疫苗的免疫信息学设计及其作为靶点的应用。
Front Immunol. 2021 Mar 2;12:621706. doi: 10.3389/fimmu.2021.621706. eCollection 2021.
9
An immunoinformatics-based designed multi-epitope candidate vaccine (mpme-VAC/STV-1) against Mycoplasma pneumoniae.一种基于免疫信息学设计的针对肺炎支原体的多表位候选疫苗(mpme-VAC/STV-1)。
Comput Biol Med. 2022 Mar;142:105194. doi: 10.1016/j.compbiomed.2021.105194. Epub 2021 Dec 31.
10
A comprehensive screening of the whole proteome of hantavirus and designing a multi-epitope subunit vaccine for cross-protection against hantavirus: Structural vaccinology and immunoinformatics study.汉坦病毒全蛋白的全面筛选和设计针对汉坦病毒的多表位亚单位疫苗进行交叉保护的研究:结构疫苗学和免疫信息学研究。
Microb Pathog. 2021 Jan;150:104705. doi: 10.1016/j.micpath.2020.104705. Epub 2020 Dec 28.

引用本文的文献

1
Identification of Tumor Budding-Associated Genes in Breast Cancer through Transcriptomic Profiling and Network Diffusion Analysis.通过转录组谱分析和网络扩散分析鉴定乳腺癌中的肿瘤芽生相关基因。
Biomolecules. 2024 Jul 24;14(8):896. doi: 10.3390/biom14080896.

本文引用的文献

1
Folding non-homologous proteins by coupling deep-learning contact maps with I-TASSER assembly simulations.通过将深度学习接触图与 I-TASSER 组装模拟相结合来折叠非同源蛋白质。
Cell Rep Methods. 2021 Jul 26;1(3). doi: 10.1016/j.crmeth.2021.100014. Epub 2021 Jun 21.
2
In-silico design of a multivalent epitope-based vaccine against Candida auris.基于多价表位的抗耳念珠菌疫苗的计算机设计。
Microb Pathog. 2021 Jun;155:104879. doi: 10.1016/j.micpath.2021.104879. Epub 2021 Apr 18.
3
Exploring the cancer-testis antigen BORIS to design a novel multi-epitope vaccine against breast cancer based on immunoinformatics approaches.
基于免疫信息学方法探索癌症睾丸抗原 BORIS 以设计针对乳腺癌的新型多表位疫苗。
J Biomol Struct Dyn. 2022 Sep;40(14):6363-6380. doi: 10.1080/07391102.2021.1883111. Epub 2021 Feb 18.
4
Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries.《全球癌症统计数据 2020:全球 185 个国家和地区 36 种癌症的发病率和死亡率估计》。
CA Cancer J Clin. 2021 May;71(3):209-249. doi: 10.3322/caac.21660. Epub 2021 Feb 4.
5
SoluProt: prediction of soluble protein expression in Escherichia coli.SoluProt:大肠杆菌中可溶性蛋白质表达的预测
Bioinformatics. 2021 Apr 9;37(1):23-28. doi: 10.1093/bioinformatics/btaa1102.
6
Lung Cancer 2020: Epidemiology, Etiology, and Prevention.肺癌 2020:流行病学、病因学和预防。
Clin Chest Med. 2020 Mar;41(1):1-24. doi: 10.1016/j.ccm.2019.10.001.
7
Immunoinformatics guided rational design of a next generation multi epitope based peptide (MEBP) vaccine by exploring Zika virus proteome.基于免疫信息学,通过探索寨卡病毒蛋白组,对新一代多表位肽(MEBP)疫苗进行合理设计。
Infect Genet Evol. 2020 Jun;80:104199. doi: 10.1016/j.meegid.2020.104199. Epub 2020 Jan 18.
8
In silico analysis of transmembrane protein 31 (TMEM31) antigen to design novel multiepitope peptide and DNA cancer vaccines against melanoma.基于跨膜蛋白 31(TMEM31)抗原的计算机分析设计新型多表位肽和 DNA 癌症疫苗用于治疗黑色素瘤。
Mol Immunol. 2019 Aug;112:93-102. doi: 10.1016/j.molimm.2019.04.030. Epub 2019 May 9.
9
GalaxyRefine2: simultaneous refinement of inaccurate local regions and overall protein structure.GalaxyRefine2:同时精修不准确的局部区域和整体蛋白质结构。
Nucleic Acids Res. 2019 Jul 2;47(W1):W451-W455. doi: 10.1093/nar/gkz288.
10
Factors That Influence the Immune Response to Vaccination.影响疫苗免疫反应的因素。
Clin Microbiol Rev. 2019 Mar 13;32(2). doi: 10.1128/CMR.00084-18. Print 2019 Mar 20.