Daghagh Hossein, Rahbar Kafshboran Haniyeh, Daneshmandpour Yousef, Nasiri Aghdam Maryam, Talebian Shahrzad, Nouri Nojadeh Jafar, Hamzeiy Hamid, Biskup Saskia, Sakhinia Ebrahim
Department of Medical Genetics, Faculty of Medicine, Tabriz University of Medical Sciences, Tabriz, Iran.
Tabriz Genetic Analysis Centre (TGAC), Tabriz University of Medical Sciences, Tabriz, Iran.
Bioimpacts. 2023;13(3):183-190. doi: 10.34172/bi.2022.23528. Epub 2022 Nov 26.
The gene encodes the receptor for colony-stimulating factor-1, the macrophage, and monocyte-specific growth factor. Mutations in this gene cause hereditary diffuse leukoencephalopathy with spheroids (HDLS) with autosomal dominant inheritance and BANDDOS (Brain Abnormalities, Neurodegeneration, and Dysosteosclerosis) with autosomal recessive inheritance.
Targeted gene sequencing was performed on the genomic DNA samples of the deceased patient and a fetus along with ten healthy members of his family to identify the disease-causing mutation. Bioinformatics tools were used to study the mutation effect on protein function and structure. To predict the effect of the mutation on the protein, various bioinformatics tools were applied.
A novel homozygous variant was identified in the gene , c.2498C>T; p.T833M in exon 19, in the index patient and the fetus. Furthermore, some family members were heterozygous for this variant, while they had not any symptoms of the disease. In silico analysis indicated this variant has a detrimental effect on CSF1R. It is conserved among humans and other similar species. The variant is located within the functionally essential PTK domain of the receptor. However, no structural damage was introduced by this substitution.
In conclusion, regarding the inheritance pattern in the family and clinical manifestations in the index patient, we propose that the mentioned variant in the gene may cause BANDDOS.
该基因编码集落刺激因子-1的受体,即巨噬细胞和单核细胞特异性生长因子。该基因的突变会导致常染色体显性遗传的伴有球状体的遗传性弥漫性白质脑病(HDLS)以及常染色体隐性遗传的脑异常、神经退行性变和骨硬化症(BANDDOS)。
对已故患者及其胎儿以及其家族中十名健康成员的基因组DNA样本进行靶向基因测序,以确定致病突变。使用生物信息学工具研究该突变对蛋白质功能和结构的影响。为预测该突变对蛋白质的影响,应用了各种生物信息学工具。
在索引患者和胎儿的该基因中鉴定出一种新的纯合变异,即第19外显子中的c.2498C>T;p.T833M。此外,一些家庭成员是该变异的杂合子,但他们没有任何疾病症状。计算机分析表明该变异对CSF1R有有害影响。它在人类和其他类似物种中保守。该变异位于受体功能必需的PTK结构域内。然而,这种替代没有造成结构损伤。
总之,考虑到该家族的遗传模式和索引患者的临床表现,我们提出该基因中提到的变异可能导致BANDDOS。