Suppr超能文献

[基因名称]的纯合突变会导致脑异常、神经退行性变和骨硬化异常(BANDDOS)。

Homozygous mutation in causes brain abnormalities, neurodegeneration, and dysosteosclerosis (BANDDOS).

作者信息

Daghagh Hossein, Rahbar Kafshboran Haniyeh, Daneshmandpour Yousef, Nasiri Aghdam Maryam, Talebian Shahrzad, Nouri Nojadeh Jafar, Hamzeiy Hamid, Biskup Saskia, Sakhinia Ebrahim

机构信息

Department of Medical Genetics, Faculty of Medicine, Tabriz University of Medical Sciences, Tabriz, Iran.

Tabriz Genetic Analysis Centre (TGAC), Tabriz University of Medical Sciences, Tabriz, Iran.

出版信息

Bioimpacts. 2023;13(3):183-190. doi: 10.34172/bi.2022.23528. Epub 2022 Nov 26.

Abstract

INTRODUCTION

The gene encodes the receptor for colony-stimulating factor-1, the macrophage, and monocyte-specific growth factor. Mutations in this gene cause hereditary diffuse leukoencephalopathy with spheroids (HDLS) with autosomal dominant inheritance and BANDDOS (Brain Abnormalities, Neurodegeneration, and Dysosteosclerosis) with autosomal recessive inheritance.

METHODS

Targeted gene sequencing was performed on the genomic DNA samples of the deceased patient and a fetus along with ten healthy members of his family to identify the disease-causing mutation. Bioinformatics tools were used to study the mutation effect on protein function and structure. To predict the effect of the mutation on the protein, various bioinformatics tools were applied.

RESULTS

A novel homozygous variant was identified in the gene , c.2498C>T; p.T833M in exon 19, in the index patient and the fetus. Furthermore, some family members were heterozygous for this variant, while they had not any symptoms of the disease. In silico analysis indicated this variant has a detrimental effect on CSF1R. It is conserved among humans and other similar species. The variant is located within the functionally essential PTK domain of the receptor. However, no structural damage was introduced by this substitution.

CONCLUSION

In conclusion, regarding the inheritance pattern in the family and clinical manifestations in the index patient, we propose that the mentioned variant in the gene may cause BANDDOS.

摘要

引言

该基因编码集落刺激因子-1的受体,即巨噬细胞和单核细胞特异性生长因子。该基因的突变会导致常染色体显性遗传的伴有球状体的遗传性弥漫性白质脑病(HDLS)以及常染色体隐性遗传的脑异常、神经退行性变和骨硬化症(BANDDOS)。

方法

对已故患者及其胎儿以及其家族中十名健康成员的基因组DNA样本进行靶向基因测序,以确定致病突变。使用生物信息学工具研究该突变对蛋白质功能和结构的影响。为预测该突变对蛋白质的影响,应用了各种生物信息学工具。

结果

在索引患者和胎儿的该基因中鉴定出一种新的纯合变异,即第19外显子中的c.2498C>T;p.T833M。此外,一些家庭成员是该变异的杂合子,但他们没有任何疾病症状。计算机分析表明该变异对CSF1R有有害影响。它在人类和其他类似物种中保守。该变异位于受体功能必需的PTK结构域内。然而,这种替代没有造成结构损伤。

结论

总之,考虑到该家族的遗传模式和索引患者的临床表现,我们提出该基因中提到的变异可能导致BANDDOS。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0372/10329754/421169a7fa42/bi-13-183-g001.jpg

相似文献

1
Homozygous mutation in causes brain abnormalities, neurodegeneration, and dysosteosclerosis (BANDDOS).
Bioimpacts. 2023;13(3):183-190. doi: 10.34172/bi.2022.23528. Epub 2022 Nov 26.
4
From HDLS to BANDDOS: fast-expanding phenotypic spectrum of disorders caused by mutations in CSF1R.
J Hum Genet. 2021 Dec;66(12):1139-1144. doi: 10.1038/s10038-021-00942-w. Epub 2021 Jun 16.
6
A novel mutation in CSF1R associated with hereditary diffuse leukoencephalopathy with spheroids.
Neurol Sci. 2022 Jan;43(1):411-417. doi: 10.1007/s10072-021-05296-x. Epub 2021 May 4.
7
9
CSF1R mutations identified in three families with autosomal dominantly inherited leukoencephalopathy.
Am J Med Genet B Neuropsychiatr Genet. 2012 Dec;159B(8):951-7. doi: 10.1002/ajmg.b.32100. Epub 2012 Oct 4.
10
[Analysis of CSF1R gene mutation in a Chinese family with hereditary diffuse leukoencephalopathy with neuroaxonal spheroids].
Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2015 Apr;32(2):208-12. doi: 10.3760/cma.j.issn.1003-9406.2015.02.012.

本文引用的文献

2
Can Predicted Protein 3D Structures Provide Reliable Insights into whether Missense Variants Are Disease Associated?
J Mol Biol. 2019 May 17;431(11):2197-2212. doi: 10.1016/j.jmb.2019.04.009. Epub 2019 Apr 14.
4
Homozygous Mutations in CSF1R Cause a Pediatric-Onset Leukoencephalopathy and Can Result in Congenital Absence of Microglia.
Am J Hum Genet. 2019 May 2;104(5):936-947. doi: 10.1016/j.ajhg.2019.03.010. Epub 2019 Apr 11.
5
Microglia exit the CNS in spinal root avulsion.
PLoS Biol. 2019 Feb 22;17(2):e3000159. doi: 10.1371/journal.pbio.3000159. eCollection 2019 Feb.
6
Clustal Omega for making accurate alignments of many protein sequences.
Protein Sci. 2018 Jan;27(1):135-145. doi: 10.1002/pro.3290. Epub 2017 Oct 30.
7
Autozygosity reveals recessive mutations and novel mechanisms in dominant genes: implications in variant interpretation.
Genet Med. 2017 Oct;19(10):1144-1150. doi: 10.1038/gim.2017.22. Epub 2017 Apr 6.
8
CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.
Nucleic Acids Res. 2017 Jan 4;45(D1):D200-D203. doi: 10.1093/nar/gkw1129. Epub 2016 Nov 29.
9
TYROBP genetic variants in early-onset Alzheimer's disease.
Neurobiol Aging. 2016 Dec;48:222.e9-222.e15. doi: 10.1016/j.neurobiolaging.2016.07.028. Epub 2016 Aug 8.
10
Microglia-derived purines modulate mossy fibre synaptic transmission and plasticity through P2X4 and A1 receptors.
Eur J Neurosci. 2016 May;43(10):1366-78. doi: 10.1111/ejn.13191. Epub 2016 Mar 1.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验