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通过局部机械相互作用实现双链肽链的协同熔融。

Cooperative melting in double-stranded peptide chains through local mechanical interactions.

机构信息

Polytechnic University of Bari, Department of Civil Environmental Land Building Engineering and Chemistry (DICATECh), Via Orabona 4, Bari 70125, Italy.

INFN, Section of Bari, Bari 70126, Italy.

出版信息

J R Soc Interface. 2023 Jul;20(204):20230130. doi: 10.1098/rsif.2023.0130. Epub 2023 Jul 12.

Abstract

The separation of double-stranded peptide chains can occur in two ways: cooperatively or non-cooperatively. These two regimes can be driven either by chemical or thermal effects, or through non-local mechanical interactions. Here, we show explicitly that local mechanical interactions in biological systems may regulate the stability, the reversibility, and the cooperative/non-cooperative character of the debonding transition. We show that this transition is characterized by a single parameter depending on an internal length scale. Our theory describes a wide range of melting transitions found in biological systems such as protein secondary structures, microtubules and tau proteins, and DNA molecules. In these cases, the theory gives the critical force as a function of the chain length and its elastic properties. Our theoretical results provide quantitative predictions for known experimental effects that appear in different biological and biomedical fields.

摘要

双链肽链的分离可以通过两种方式发生

协同或非协同。这两种状态可以由化学或热效应驱动,也可以通过非局部机械相互作用驱动。在这里,我们明确表明,生物系统中的局部机械相互作用可能调节键合转变的稳定性、可逆性和协同/非协同特征。我们表明,该转变的特征在于取决于内部长度尺度的单个参数。我们的理论描述了在生物系统中发现的广泛的熔化转变,如蛋白质二级结构、微管和 tau 蛋白以及 DNA 分子。在这些情况下,理论给出了作为链长和其弹性性质的函数的临界力。我们的理论结果为不同生物和生物医学领域中出现的已知实验效应提供了定量预测。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1254/10336389/3d49e7546911/rsif20230130f01.jpg

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