Institute of Enzymology, Research Centre for Natural Sciences, 1117 Budapest, Hungary.
Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, 1083 Budapest, Hungary.
Int J Mol Sci. 2023 Jun 21;24(13):10416. doi: 10.3390/ijms241310416.
The amyloidogenic processing of APP depends on two events: its phosphorylation by ROCK2 (at Thr654) and the phosphorylation of the APP-cleaving enzyme BACE1 (at Ser498). However, the mechanisms and structural details of APP-ROCK2 and BACE1-ROCK2 binding are unknown. Using direct physical methods in combination with an in silico approach, we found that BACE1 binds into the substrate-binding groove of ROCK2 with a low affinity (K = 18 µM), while no binding of APP to ROCK2 alone could be detected. On the other hand, a strong association (K = 3.5 nM) of APP to the weak ROCK2-BACE1 complex was observed, although no stable ternary complex was detected, i.e., BACE1 was displaced by APP. We constructed a sequential functional model: (1) BACE1 weakly binds to ROCK2 and induces an allosteric conformational change in ROCK2; (2) APP strongly binds to the ROCK2-BACE1 complex, and BACE1 is released; and (3) ROCK2 phosphorylates APP at Thr654 (leading to a longer stay in the early endosome during APP processing). Direct fluorescence titration experiments showed that the APP or APP fragments did not bind separately to the ROCK2-BACE1 complex. Based on these observations, we conclude that two binding sites are involved in the ROCK2-APP interaction: (1) the substrate-binding groove, where the APP sequence containing Thr654 sits and (2) the allosteric binding site, where the APP sequence binds. These results open the way to attack the allosteric site to prevent APP phosphorylation at Thr654 by ROCK2 without inhibiting the activity of ROCK2 towards its other substrates.
淀粉样蛋白前体蛋白(APP)的淀粉样蛋白生成过程依赖于两个事件:其被 ROCK2(在 Thr654 处)磷酸化,以及 APP 切割酶 BACE1(在 Ser498 处)磷酸化。然而,APP-ROCK2 和 BACE1-ROCK2 结合的机制和结构细节尚不清楚。我们使用直接物理方法结合计算方法,发现 BACE1 以低亲和力(K = 18 µM)结合到 ROCK2 的底物结合槽中,而单独检测到 APP 与 ROCK2 无结合。另一方面,观察到 APP 与弱 ROCK2-BACE1 复合物的强烈结合(K = 3.5 nM),尽管没有检测到稳定的三元复合物,即 BACE1 被 APP 取代。我们构建了一个顺序功能模型:(1)BACE1 弱结合到 ROCK2 并诱导 ROCK2 的变构构象变化;(2)APP 强烈结合到 ROCK2-BACE1 复合物,BACE1 被释放;和(3)ROCK2 在 Thr654 处磷酸化 APP(导致 APP 加工过程中在早期内体中停留时间更长)。直接荧光滴定实验表明,APP 或 APP 片段不会单独结合到 ROCK2-BACE1 复合物上。基于这些观察结果,我们得出结论,两个结合位点参与了 ROCK2-APP 相互作用:(1)底物结合槽,其中包含 Thr654 的 APP 序列位于其中;(2)变构结合位点,其中 APP 序列结合。这些结果为攻击变构位点开辟了道路,以防止 ROCK2 在 Thr654 处磷酸化 APP,而不抑制 ROCK2 对其其他底物的活性。