Department of Genetics, School of Life Sciences, University of KwaZulu Natal, Westville Campus, Private Bag X 54001, Durban, KwaZulu-Natal, South Africa.
Curr Microbiol. 2023 Jul 25;80(9):299. doi: 10.1007/s00284-023-03413-x.
Microbial communities present in body fluids can assist in distinguishing between types of body fluids. Metagenomic studies have reported bacterial genera which are core to specific body fluids and are greatly influenced by geographical location and ethnicity. Bacteria in body fluids could also be due to bacterial infection; hence, it would be worthwhile taking into consideration bacterial species associated with diseases. The present review reports bacterial species characteristic of diseased and healthy body fluids across geographical locations, and bacteria described in forensic studies, with the aim of collating a set of bacteria to serve as the core species-specific markers for forensic body fluid identification. The most widely reported saliva-specific bacterial species are Streptococcus salivarius, Prevotella melaninogenica, Neisseria flavescens, with Fusobacterium nucleatum associated with increased diseased state. Lactobacillus crispatus and Lactobacillus iners are frequently dominant in the vaginal microbiome of healthy women. Atopobium vaginae, Prevotella bivia, and Gardnerella vaginalis are more prevalent in women with bacterial vaginosis. Semen and urine-specific bacteria at species level have not been reported, and menstrual blood bacteria are indistinguishable from vaginal fluid. Targeting more than one bacterial species is recommended for accurate body fluid identification. Although metagenomic sequencing provides information of a broad microbial profile, the specific bacterial species could be used to design biosensors for rapid body fluid identification. Validation of microbial typing methods and its application in identifying body fluids in a mixed sample would allow regular use of microbial profiling in a forensic workflow.
体液中的微生物群落有助于区分不同类型的体液。宏基因组研究报告了一些细菌属,这些细菌属是特定体液的核心,并且受到地理位置和种族的极大影响。体液中的细菌也可能是由于细菌感染引起的;因此,考虑与疾病相关的细菌种类是值得的。本综述报告了跨地理位置的患病和健康体液以及法医研究中描述的细菌的特征物种,旨在整理出一套细菌作为法医体液鉴定的核心种特异性标记物。报道最多的唾液特异性细菌物种是唾液链球菌、黑色素普雷沃氏菌和微黄奈瑟菌,而具核梭杆菌与疾病状态增加有关。阴道微生物组中经常占主导地位的是卷曲乳杆菌和惰性乳杆菌。加德纳菌和普雷沃菌更常见于细菌性阴道病患者。在物种水平上,精液和尿液特异性细菌尚未报道,月经血细菌与阴道液无法区分。建议针对多种细菌进行靶向检测,以实现更准确的体液鉴定。虽然宏基因组测序提供了广泛的微生物图谱信息,但特定的细菌物种可用于设计用于快速体液识别的生物传感器。验证微生物分型方法及其在混合样本中鉴定体液的应用将允许在法医工作流程中常规使用微生物分析。