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猪 DNMT1 变体:分子克隆和特异性多克隆抗体的产生。

A Porcine DNMT1 Variant: Molecular Cloning and Generation of Specific Polyclonal Antibody.

机构信息

Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, 518 Ziyue Road, Shanghai 200241, China.

出版信息

Genes (Basel). 2023 Jun 23;14(7):1324. doi: 10.3390/genes14071324.

DOI:10.3390/genes14071324
PMID:37510229
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10379332/
Abstract

DNA methyltransferase 1 (DNMT1), the first-identified DNA methyltransferase in mammals, has been well studied in the control of embryo development and somatic homeostasis in mice and humans. Accumulating reports have demonstrated that DNMT1 plays an important role in the regulation of differentiation and the activation of immune cells. However, little is known about the effects of porcine DNMT1 on such functional regulation, especially the regulation of the biological functions of immune cells. In this study, we report the cloning of (4833 bp in length) from porcine alveolar macrophages (PAMs). According to the sequence of the cloned DNMT1 gene, the deduced protein sequence contains a total of 1611 amino acids with a 2 amino acid insertion, a 1 amino acid deletion, and 12 single amino acid mutations in comparison to the reported DNMT1 protein. A polyclonal antibody based on a synthetic peptide was generated to study the expression of the porcine DNMT1. The polyclonal antibody only recognized the cloned porcine DNMT1 and not the previously reported protein due to a single amino acid difference in the antigenic peptide region. However, the polyclonal antibody recognized the endogenous DNMT1 in several porcine cells (PAM, PK15, ST, and PIEC) and the cells of other species (HEK-293T, Marc-145, MDBK, and MDCK cells). Moreover, our results demonstrated that all the detected tissues of piglet express DNMT1, which is the same as that in porcine alveolar macrophages. In summary, we have identified a porcine DNMT1 variant with sequence and expression analyses.

摘要

DNA 甲基转移酶 1(DNMT1)是哺乳动物中首次被鉴定的 DNA 甲基转移酶,其在胚胎发育和哺乳动物体细胞稳态的控制中已得到深入研究。越来越多的报道表明,DNMT1 在免疫细胞的分化和激活的调控中发挥着重要作用。然而,对于猪 DNMT1 对这种功能调控的影响,特别是对免疫细胞的生物学功能的调控,人们知之甚少。在本研究中,我们从猪肺泡巨噬细胞(PAMs)中克隆了(长度为 4833bp)。根据克隆的 DNMT1 基因序列,推导的蛋白质序列共包含 1611 个氨基酸,与报道的 DNMT1 蛋白相比,有 2 个氨基酸插入、1 个氨基酸缺失和 12 个单个氨基酸突变。基于合成肽生成了多克隆抗体来研究猪 DNMT1 的表达。多克隆抗体仅识别克隆的猪 DNMT1,而不识别先前报道的蛋白,因为抗原肽区域的单个氨基酸不同。然而,该多克隆抗体识别几种猪细胞(PAM、PK15、ST 和 PIEC)和其他物种的细胞(HEK-293T、Marc-145、MDBK 和 MDCK 细胞)中的内源性 DNMT1。此外,我们的结果表明,仔猪的所有检测组织均表达 DNMT1,这与猪肺泡巨噬细胞中的表达情况相同。总之,我们已经鉴定了一种具有序列和表达分析的猪 DNMT1 变体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/61e171122db1/genes-14-01324-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/662640a203e5/genes-14-01324-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/59c6affa13ca/genes-14-01324-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/0d8399e7433c/genes-14-01324-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/61e171122db1/genes-14-01324-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/662640a203e5/genes-14-01324-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/59c6affa13ca/genes-14-01324-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/0d8399e7433c/genes-14-01324-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f62/10379332/61e171122db1/genes-14-01324-g004.jpg

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本文引用的文献

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Domain Structure of the Dnmt1, Dnmt3a, and Dnmt3b DNA Methyltransferases.DNA 甲基转移酶 Dnmt1、Dnmt3a 和 Dnmt3b 的结构域。
Adv Exp Med Biol. 2022;1389:45-68. doi: 10.1007/978-3-031-11454-0_3.
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Whole-genome resequencing reveals genetic structure and introgression in Pudong White pigs.全基因组重测序揭示了浦东白猪的遗传结构和基因渐渗。
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Co-stimulation with opposing macrophage polarization cues leads to orthogonal secretion programs in individual cells.共刺激作用与相反的巨噬细胞极化信号共同作用,导致单个细胞中正交的分泌程序。
Nat Commun. 2021 Jan 12;12(1):301. doi: 10.1038/s41467-020-20540-2.
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A natural DNMT1 mutation elevates the fetal hemoglobin level via epigenetic derepression of the γ-globin gene in β-thalassemia.一种自然发生的 DNMT1 突变通过表观遗传去抑制β-地中海贫血中γ-珠蛋白基因,从而提高胎儿血红蛋白水平。
Blood. 2021 Mar 25;137(12):1652-1657. doi: 10.1182/blood.2020006425.
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Identification of DNMT3B2 as the Predominant Isoform of DNMT3B in Porcine Alveolar Macrophages and Its Involvement in LPS-Stimulated TNF-α Expression.鉴定 DNMT3B2 为猪肺泡巨噬细胞中 DNMT3B 的主要亚型及其在 LPS 刺激的 TNF-α 表达中的作用。
Genes (Basel). 2020 Sep 10;11(9):1065. doi: 10.3390/genes11091065.
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