Suppr超能文献

基于药物敏感性和肿瘤微环境的新型衰老相关基因构建和验证非小细胞肺癌患者预后模型。

Construction and Validation of a Prognostic Model Based on Novel Senescence-Related Genes in Non-Small Cell Lung Cancer Patients with Drug Sensitivity and Tumor Microenvironment.

机构信息

Department of Thoracic Surgery and Oncology, the First Affiliated Hospital of Guangzhou Medical University, State Key Laboratory of Respiratory Disease & National Clinical Research Center for Respiratory Disease, Guangzhou, 510120, China.

School of Clinical Medicine, Henan University, Kaifeng, 475000, China.

出版信息

Adv Biol (Weinh). 2023 Dec;7(12):e2300190. doi: 10.1002/adbi.202300190. Epub 2023 Jul 30.

Abstract

Cellular senescence contributes to cancer pathogenesis and immune regulation. Using the LASSO Cox regression, we developed a 12-gene prognostic signature for lung adenocarcinoma (LUAD) from The Cancer Genome Atlas (TCGA) and a Gene Expression Omnibus (GEO) dataset. We assessed gene expression, drug sensitivity, immune infiltration, and conducted cell line experiments. High-risk LUAD patients showed increased mortality risk and shorter survival (P < 0.001). Senescence-related gene analysis indicated differences in protein phosphorylation and DNA methylation between normal individuals and LUAD patients. The high-risk group showed a positive association with PD-L1 expression (P = 0.003). Single-cell sequencing data suggested PEBP1 might significantly impact T cell infiltration. We predicted potential sensitive compounds for 12 senescence genes and found GAPDH promoted cell line proliferation. We established a novel prognostic system based on a newly identified senescence gene. High-risk patients had elevated immunosuppressive markers, and PEBP1 might influence T cell infiltration significantly. GAPDH, expressed at higher levels in tumors, could affect cancer progression. Our drug prediction model may guide treatment selection.

摘要

细胞衰老有助于癌症发病机制和免疫调节。我们使用 LASSO Cox 回归,从癌症基因组图谱(TCGA)和基因表达综合数据库(GEO)数据集中开发了一个用于肺腺癌(LUAD)的 12 基因预后特征。我们评估了基因表达、药物敏感性、免疫浸润,并进行了细胞系实验。高风险 LUAD 患者的死亡率更高,生存期更短(P<0.001)。衰老相关基因分析表明,正常个体和 LUAD 患者之间的蛋白磷酸化和 DNA 甲基化存在差异。高风险组与 PD-L1 表达呈正相关(P=0.003)。单细胞测序数据表明,PEBP1 可能显著影响 T 细胞浸润。我们预测了 12 个衰老基因的潜在敏感化合物,发现 GAPDH 促进了细胞系的增殖。我们建立了一个基于新发现的衰老基因的新的预后系统。高风险患者的免疫抑制标志物升高,PEBP1 可能显著影响 T 细胞浸润。肿瘤中高表达的 GAPDH 可能会影响癌症的进展。我们的药物预测模型可能指导治疗选择。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验