Department of Physics, Bernal Institute, University of Limerick, Limerick V94T9PX, Ireland.
Merck, Kenilworth, New Jersey 07033, United States.
J Chem Inf Model. 2023 Aug 14;63(15):4934-4947. doi: 10.1021/acs.jcim.3c00752. Epub 2023 Jul 31.
Peptides are sustainable alternatives to conventional therapeutics for G protein-coupled receptor (GPCR) linked disorders, promising biocompatible and tailorable next-generation therapeutics for metabolic disorders including type-2 diabetes, as agonists of the glucagon receptor (GCGR) and the glucagon-like peptide-1 receptor (GLP-1R). However, single agonist peptides activating GLP-1R to stimulate insulin secretion also suppress obesity-linked glucagon release. Hence, bioactive peptides cotargeting GCGR and GLP-1R may remediate the blood glucose and fatty acid metabolism imbalance, tackling both diabetes and obesity to supersede current monoagonist therapy. Here, we design and model optimized peptide sequences starting from peptide sequences derived from earlier phage-displayed library screening, identifying those with predicted molecular binding profiles for dual agonism of GCGR and GLP-1R. We derive design rules from extensive molecular dynamics simulations based on peptide-receptor binding. Our newly designed coagonist peptide exhibits improved predicted coupled binding affinity for GCGR and GLP-1R relative to endogenous ligands and could in the future be tested experimentally, which may provide superior glycemic and weight loss control.
肽是治疗 G 蛋白偶联受体 (GPCR) 相关疾病的传统疗法的可持续替代品,有望成为代谢疾病(包括 2 型糖尿病)的生物相容性和可定制的下一代治疗药物,作为胰高血糖素受体 (GCGR) 和胰高血糖素样肽-1 受体 (GLP-1R) 的激动剂。然而,激活 GLP-1R 以刺激胰岛素分泌的单一激动肽也会抑制与肥胖相关的胰高血糖素释放。因此,靶向 GCGR 和 GLP-1R 的生物活性肽可能会纠正血糖和脂肪酸代谢失衡,既能治疗糖尿病又能治疗肥胖症,从而取代目前的单激动剂治疗。在这里,我们从早期噬菌体展示文库筛选中得到的肽序列开始,设计和模拟优化的肽序列,确定那些具有预测的分子结合特性,可双重激动 GCGR 和 GLP-1R。我们从基于肽-受体结合的广泛分子动力学模拟中得出设计规则。我们新设计的共激动肽相对于内源性配体表现出改善的预测偶联结合亲和力,可用于未来的实验测试,这可能提供更好的血糖和体重控制。