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新型吲唑并吡咯-4-酮衍生物作为强效 BRDT 抑制剂的研究:合成、分子对接、类药性、ADMET 和 DFT 研究。

Novel indenopyrrol-4-one derivatives as potent BRDT inhibitors: synthesis, molecular docking, drug-likeness, ADMET, and DFT studies.

机构信息

Department of Chemistry, Faculty of Science, University of Guilan, Rasht, Iran.

Department of Chemistry, Faculty of Science, Imam Khomeini International University, Qazvin, Iran.

出版信息

J Biomol Struct Dyn. 2024 Sep;42(15):7860-7873. doi: 10.1080/07391102.2023.2242502. Epub 2023 Aug 1.

DOI:10.1080/07391102.2023.2242502
PMID:37528682
Abstract

We synthesized new, structurally distinct series of indeno[1,2-]pyrrol-4(1)-ones. Effective derivatives were found by in screening, and our studies revealed that compound exhibited good binding energies for inhibition of BRDT. In addition, DFT studies were carried out by means of the B3LYP/6-3lG basis set in the gas phase to investigate the conformation of protein-ligand interactions. The results of the investigation suggest that these compounds could be considered novel BRDT inhibitors. The pharmacokinetic and drug-like properties of the new indenopyrrol-4(1)-one derivatives exhibited that these compounds could be represented as potential candidates for further development into anticancer-like agents. Additionally, based on the optimised structures, the optimum geometry for each of the selected molecules was developed. Then, the estimated and the experimentally determined IR vibrational frequencies for each compound were compared. The results of this comparison showed that the theoretical and experimental data were in excellent agreement, which could support the reliability of the experimental analytical data and the applicability of the mathematical model.Communicated by Ramaswamy H. Sarma.

摘要

我们合成了新型、结构独特的茚并[1,2-b]吡咯-4(1H)-酮系列化合物。通过筛选发现了有效的衍生物,我们的研究表明,化合物对 BRDT 的抑制表现出良好的结合能。此外,还通过 B3LYP/6-3lG 基组在气相中进行了密度泛函理论研究,以研究蛋白质-配体相互作用的构象。研究结果表明,这些化合物可被视为新型 BRDT 抑制剂。新的茚并吡咯-4(1H)-酮衍生物的药代动力学和类药性表明,这些化合物可能被认为是进一步开发为抗癌剂的潜在候选物。此外,基于优化的结构,为每个选定的分子开发了最佳的几何形状。然后,比较了每个化合物的估算和实验确定的 IR 振动频率。比较结果表明,理论和实验数据非常吻合,这可以支持实验分析数据的可靠性和数学模型的适用性。由 Ramaswamy H. Sarma 传达。

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