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全面看待抗癌药物来氟米特与人血清白蛋白的生物分子识别。

Comprehensive views toward the biomolecular recognition of an anticancer drug, leflunomide with human serum albumin.

机构信息

Faculty of Pharmacy, Department of Analytical Chemistry, Ankara University, Ankara, Turkey.

Faculty of Science, Bioinformatics Programme, Institute of Biological Sciences, University of Malaya, Kuala Lumpur, Malaysia.

出版信息

J Biomol Struct Dyn. 2024 Sep;42(14):7257-7271. doi: 10.1080/07391102.2023.2239931. Epub 2023 Aug 2.

Abstract

Biomolecular association of an anticancer drug, leflunomide (LEF) with human serum albumin (HSA), the leading ligands carrier in human circulation was characterized using biophysical ( fluorescence, absorption and voltammetric) methods and computational ( molecular docking and molecular dynamics simulation) techniques. Evaluations of fluorescence, absorption and voltammetric findings endorsed the complex formation between LEF and HSA. An inverse relationship of Stern-Volmer constant-temperature and hyperchromic shift of the protein's absorption signal with addition of LEF confirmed the LEF quenched the HSA fluorescence through static process. Moderate nature of binding strength (binding constant = 2.76-4.77 × 10 M) was detected towards the LEF-HSA complexation, while the association process was naturally driven hydrophobic interactions, van der Waals interactions and hydrogen bonds, as evident from changes in entropy (Δ= + 19.91 J mol K) and enthalpy (Δ = - 20.09 kJ mol), and molecular docking assessments. Spectral analyses of synchronous and three-dimensional fluorescence validated microenvironmental fluctuations near Trp and Tyr residues upon LEF binding to the protein. LEF association with HSA significantly defended temperature-induced destabilization of the protein. Although LEF was found to attach to HSA at Sudlow's sites I and II, but exhibited greater preference toward its site I, as detected by the investigations of competitive site-marker displacement. Molecular dynamics simulation assessment revealed that the complex attained equilibrium throughout simulations, showing the LEF-HSA complex constancy.Communicated by Ramaswamy H. Sarma.

摘要

采用生物物理(荧光、吸收和伏安)方法和计算(分子对接和分子动力学模拟)技术,研究了抗癌药物来氟米特(LEF)与人血清白蛋白(HSA)的生物分子缔合,HSA 是人体循环中主要的配体载体。荧光、吸收和伏安评估结果证实了 LEF 与 HSA 之间形成了复合物。随着 LEF 的加入,Stern-Volmer 常数-温度的逆相关性和蛋白质吸收信号的增色位移证实了 LEF 通过静态过程猝灭了 HSA 的荧光。对 LEF-HSA 络合的结合强度(结合常数=2.76-4.77×10 M)进行了中等强度的检测,而结合过程是由自然驱动力驱动的,包括疏水相互作用、范德华相互作用和氢键,这从熵(Δ=+19.91 J mol K)和焓(Δ=-20.09 kJ mol)的变化以及分子对接评估中可以明显看出。同步和三维荧光的光谱分析验证了在 LEF 与蛋白质结合时色氨酸和酪氨酸残基附近微环境的波动。LEF 与 HSA 的结合显著防止了蛋白质因温度诱导而不稳定。虽然 LEF 被发现结合在 Sudlow 位点 I 和 II 上,但通过竞争性位点标记置换的研究发现,它对位点 I 具有更大的偏好。分子动力学模拟评估表明,该复合物在整个模拟过程中达到了平衡,显示出 LEF-HSA 复合物的稳定性。由 Ramaswamy H. Sarma 传达。

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