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宫颈癌进展的体细胞突变及关键驱动因素分析

Analysis of somatic mutations and key driving factors of cervical cancer progression.

作者信息

Niyazi Mayinuer, Han Lili, Husaiyin Sulaiya, Aishanjiang Ayimila, Guo Min, Muhaimati Gulibanu, Rozi Hankez, Sun Haiyan, Lu Jing, Ma Chunhua, Rouzi Nuermangul, Liu Xiaowan, Zhu Kaichun

机构信息

Department of Obstetrics and Gynecology, People's Hospital of Xinjiang Uygur Autonomous Region, Urumqi 830001, China.

Department of Obstetrics and Gynecology, People's Hospital of Xinjiang Uygur Autonomous Region, No. 91, Tianchi Road, Tianshan District, Urumqi 830001, China.

出版信息

Open Med (Wars). 2023 Jul 28;18(1):20230759. doi: 10.1515/med-2023-0759. eCollection 2023.

Abstract

We investigated the somatic mutations and key driving factors of cervical cancer by whole exome sequencing . We found 22,183 somatic single nucleotide variations (SNVs) in 52 paired samples. Somatic SNVs in cervical cancer were significantly higher than those in high-grade intraepithelial lesion and low-grade squamous intraepithelial lesion groups ( < 0.05). C → T/G accounted for 44.12% of base substitution. Copy number variation (false discovery rate < 0.05) was found in 57 chromosome regions. The three regions with significant differences between cervical cancer and non-cervical cancer groups were 1q21.1, 3q26.33, and 13q33.1, covering genes related to tumor proliferation, differentiation, and apoptosis. The frequency of human papillomavirus (HPV) insertion/integration and the number of "" mutations in the cervical cancer group were significantly higher than those in the non-cervical cancer group ( < 0.05). The total number of mutations was positively correlated with the number of "" mutations ( = 0.7967). HPV insertion/integration (OR = 2.302, CI = 1.523-3.589, = 0.0005), enrichment (OR = 17.875, CI = 2.117-150.937, = 0.001), and in (OR = 6.435, CI = 0.823-48.919, = 0.0042) were risk factors for cervical cancer, while in was a protective factor (OR = 0.426, CI = 0.197-0.910, = 0.032). Conclusively, HPV insertion/integration, mutagenesis, and polymorphisms are high-risk factors for cervical cancer and may be causes of genome instability and somatic mutations. This study provides experimental data for revealing the molecular mechanism of cervical cancer.

摘要

我们通过全外显子组测序研究了宫颈癌的体细胞突变和关键驱动因素。我们在52对样本中发现了22,183个体细胞单核苷酸变异(SNV)。宫颈癌中的体细胞SNV显著高于高级别上皮内瘤变和低级别鳞状上皮内瘤变组(<0.05)。C→T/G占碱基替换的44.12%。在57个染色体区域发现了拷贝数变异(错误发现率<0.05)。宫颈癌组与非宫颈癌组之间有显著差异的三个区域是1q21.1、3q26.33和13q33.1,涵盖了与肿瘤增殖、分化和凋亡相关的基因。宫颈癌组中人乳头瘤病毒(HPV)插入/整合的频率和“”突变的数量显著高于非宫颈癌组(<0.05)。突变总数与“”突变的数量呈正相关(=0.7967)。HPV插入/整合(OR=2.302,CI=1.523 - 3.589,=0.0005)、富集(OR=17.875,CI=2.117 - 150.937,=0.001)和在中的(OR=6.435,CI=0.823 - 48.919,=0.0042)是宫颈癌的危险因素,而在中的是保护因素(OR=0.426,CI=0.197 - 0.910,=0.032)。总之,HPV插入/整合、诱变和多态性是宫颈癌的高危因素,可能是基因组不稳定和体细胞突变的原因。本研究为揭示宫颈癌的分子机制提供了实验数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9aa8/10390753/4ea964e95cdc/j_med-2023-0759-fig001.jpg

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