Jensen Maja, Chandrasekaran Venkataragavan, García-Bonete María-José, Li Shuxiang, Anindya Atsarina Larasati, Andersson Karin, Erlandsson Malin C, Oparina Nina Y, Burmann Björn M, Brath Ulrika, Panchenko Anna R, Bokarewa I Maria, Katona Gergely
Department of Chemistry and Molecular Biology, Faculty of Science, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden.
Department of Rheumatology and Inflammation Research, Institute of Medicine, University of Gothenburg, Box 480, 40530 Gothenburg, Sweden.
iScience. 2023 May 29;26(7):106976. doi: 10.1016/j.isci.2023.106976. eCollection 2023 Jul 21.
This study investigates the role of survivin in epigenetic control of gene transcription through interaction with the polycomb repressive complex 2 (PRC2). PRC2 is responsible for silencing gene expression by trimethylating lysine 27 on histone 3. We observed differential expression of PRC2 subunits in CD4 T cells with varying levels of survivin expression, and ChIP-seq results indicated that survivin colocalizes with PRC2 along DNA. Inhibition of survivin resulted in a significant increase in H3K27 trimethylation, implying that survivin prevents PRC2 from functioning. Peptide microarray showed that survivin interacts with peptides from PRC2 subunits, and machine learning revealed that amino acid composition contains relevant information for predicting survivin interaction. NMR and BLI experiments supported the interaction of survivin with PRC2 subunit EZH2. Finally, protein-protein docking revealed that the survivin-EZH2 interaction interface overlaps with catalytic residues of EZH2, potentially inhibiting its H3K27 methylation activity. These findings suggest that survivin inhibits PRC2 function.
本研究通过与多梳抑制复合物2(PRC2)相互作用,探讨存活素在基因转录表观遗传调控中的作用。PRC2负责通过对组蛋白3上的赖氨酸27进行三甲基化来沉默基因表达。我们观察到在存活素表达水平不同的CD4 T细胞中PRC2亚基的差异表达,并且染色质免疫沉淀测序(ChIP-seq)结果表明存活素与PRC2沿DNA共定位。存活素的抑制导致H3K27三甲基化显著增加,这意味着存活素会阻止PRC2发挥作用。肽微阵列显示存活素与PRC2亚基的肽相互作用,并且机器学习表明氨基酸组成包含预测存活素相互作用的相关信息。核磁共振(NMR)和生物层干涉(BLI)实验支持存活素与PRC2亚基EZH2的相互作用。最后,蛋白质-蛋白质对接显示存活素-EZH2相互作用界面与EZH2的催化残体重叠,可能抑制其H3K27甲基化活性。这些发现表明存活素会抑制PRC2的功能。