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基于CSSL-Z403及其剖析的单片段和双片段代换系的水稻粒型QTLs遗传效应分析

Genetic Effects Analysis of QTLs for Rice Grain Size Based on CSSL-Z403 and Its Dissected Single and Dual-Segment Substitution Lines.

作者信息

Xu Guangyi, Deng Keli, Yu Jinjin, Li Qiaolong, Li Lu, Xiang Aoni, Ling Yinghua, Zhang Changwei, Zhao Fangming

机构信息

Rice Research Institute, Academy of Agricultural Science, Engineering Research Center of South Upland Agriculture, Ministry of Education, Southwest University, Chongqing 400715, China.

出版信息

Int J Mol Sci. 2023 Jul 27;24(15):12013. doi: 10.3390/ijms241512013.

DOI:10.3390/ijms241512013
PMID:37569388
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10418668/
Abstract

Rice chromosomal segment substitution lines (CSSLs) are ideal materials for studying quantitative traits such as grain size. Here, a rice large-grain CSSL-Z403 was identified among progeny of the recipient Xihui18 and the donor Jinhui35 based on molecular marker-assisted selection. Z403 carried 10 substitution segments with average length of 3.01 Mb. Then, a secondary F population derived from a cross between Xihui18 and Z403 was used to map quantitative trait loci (QTL) for grain size. Six QTLs distributed on chromosomes 5, 6, 7, 9 and 12 were detected. Finally four single-segment substitution lines (SSSLs) and two dual-segment substitution lines (DSSLs) carrying these target QTLs were constructed, and 10 novel QTLs were identified by four SSSLs. The large grain of Z403 was controlled at least by , , and , and its grain weight was influenced through grain length QTL such as , , and , as well as grain width QTL such as , , and . Among 16 QTLs, four QTLs including , etc., might be novel compared with the reported documents. Again, positive or less negative epistatic effects between two non-allelic QTLs (additive effect > 0) may assist screening the genotype with larger grain size in further selection.

摘要

水稻染色体片段代换系(CSSLs)是研究粒型等数量性状的理想材料。在此,基于分子标记辅助选择,在受体西恢18和供体金恢35的后代中鉴定出一个水稻大粒CSSL-Z403。Z403携带10个代换片段,平均长度为3.01 Mb。然后,以西恢18和Z403杂交产生的次级F群体用于定位粒型数量性状基因座(QTL)。检测到分布在第5、6、7、9和12号染色体上的6个QTL。最后构建了携带这些目标QTL的4个单片段代换系(SSSLs)和2个双片段代换系(DSSLs),并通过4个SSSLs鉴定出10个新的QTL。Z403的大粒至少受 、 、 和 控制,其粒重受粒长QTL如 和 以及粒宽QTL如 、 和 的影响。在16个QTL中,包括 等在内的4个QTL与已报道文献相比可能是新的。此外,两个非等位QTL之间的正向或较小负向上位性效应(加性效应>0)可能有助于在进一步选择中筛选出粒型较大的基因型。

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本文引用的文献

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Mol Breed. 2022 Mar 24;42(4):19. doi: 10.1007/s11032-022-01284-x. eCollection 2022 Apr.
2
Ribonuclease H-like gene SMALL GRAIN2 regulates grain size in rice through brassinosteroid signaling pathway.核糖核酸酶 H 样基因 SMALL GRAIN2 通过油菜素内酯信号通路调控水稻粒长。
J Integr Plant Biol. 2022 Oct;64(10):1883-1900. doi: 10.1111/jipb.13333. Epub 2022 Sep 14.
3
QTL Analysis of Z414, a Chromosome Segment Substitution Line with Short, Wide Grains, and Substitution Mapping of qGL11 in Rice.
Development of Single-Segment Substitution Lines and Fine-Mapping of for Spikelets Per Panicle and for Grain Width Based on Rice Dual-Segment Substitution Line Z783.
基于水稻两段式代换系 Z783 开发单片段代换系和精细定位每穗小穗数 和粒宽
Int J Mol Sci. 2023 Dec 9;24(24):17305. doi: 10.3390/ijms242417305.
水稻短宽粒染色体片段代换系Z414的QTL分析及qGL11的代换定位
Rice (N Y). 2022 May 9;15(1):25. doi: 10.1186/s12284-022-00571-7.
4
Identification and Pyramiding of QTLs for Rice Grain Size Based on Short-Wide Grain CSSL-Z563 and Fine-Mapping of qGL3-2.基于短宽粒型CSSL-Z563的水稻粒型QTL鉴定与聚合及qGL3-2的精细定位
Rice (N Y). 2021 Apr 13;14(1):35. doi: 10.1186/s12284-021-00477-w.
5
Detecting CSSLs and yield QTLs with additive, epistatic and QTL×environment interaction effects from Oryza sativa × O. nivara IRGC81832 cross.从水稻(Oryza sativa)×野败(O. nivara)IRGC81832 杂交后代中检测到具有加性、上位性和 QTL×环境互作效应的 CSSLs 和产量 QTL。
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