Chemistry and Chemical Engineering Research Center of Iran, Tehran, Iran.
Department of Chemistry, Payame Noor University (PNU), Tehran, Iran.
J Biomol Struct Dyn. 2024 Oct;42(16):8229-8241. doi: 10.1080/07391102.2023.2246564. Epub 2023 Aug 14.
In this paper, we performed thorough experimental and theoretical calculations to examine the interaction between Pt derivative, as an anticancer, and ct-DNA. The mode of DNA binding with [Pt(NH)(Isopentylgly)]NO, where Isopentylgly is Isopentyl glycine, was evaluated by various spectroscopic methods, docking, and molecular dynamics simulation studies. UV-Vis and fluorescence spectroscopic titration results and CD spectra of DNA-drug showed this interaction is groove binding. Also, thermal stability studies or DNA melting temperature changes (ΔT), as well as the quenching emissions monitoring proved it. Also, the thermodynamic parameter and binding constant displayed that complex-DNA formation is a spontaneous process, and H-binding and also groove binding were found to be the main forces. Theoretical studies stated [Pt(NH)(Isopentylgly)]NO-DNA formation occurs on C-G center on DNA, along with rising DNA-compound stability. value against the human breast cell line probably is due to the Isopentyl glycine ligand in the structure of the Pt compound, and it was obtained more than cisplatin and less than carboplatin against the MCF7 cell.Communicated by Ramaswamy H. Sarma.
在本文中,我们进行了彻底的实验和理论计算,以研究作为抗癌药物的 Pt 衍生物与 ct-DNA 之间的相互作用。通过各种光谱方法、对接和分子动力学模拟研究评估了 [Pt(NH)(Isopentylgly)]NO(其中 Isopentylgly 是异戊基甘氨酸)与 DNA 的结合模式。紫外-可见和荧光光谱滴定结果以及 DNA-药物的 CD 光谱表明,这种相互作用是沟槽结合。此外,热稳定性研究或 DNA 熔点变化(ΔT)以及荧光猝灭监测也证明了这一点。此外,热力学参数和结合常数表明,复合物与 DNA 的形成是一个自发的过程,氢键和沟槽结合是主要的作用力。理论研究表明,[Pt(NH)(Isopentylgly)]NO 与 DNA 的形成发生在 DNA 的 C-G 中心,同时提高了 DNA-化合物的稳定性。对人乳腺癌细胞系的 值可能归因于 Pt 化合物结构中的异戊基甘氨酸配体,它对 MCF7 细胞的活性高于顺铂,低于卡铂。由 Ramaswamy H. Sarma 交流。