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鉴定猪德尔塔冠状病毒结构蛋白中的潜在 SLA-I 特异性 T 细胞表位。

Identification of potential SLA-I-specific T-cell epitopes within the structural proteins of porcine deltacoronavirus.

机构信息

Research Center for Swine Diseases, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu 611130, China.

Sichuan Science-Observation Experimental Station for Veterinary Drugs and Veterinary Diagnostic Technology, Ministry of Agriculture, Chengdu 611130, China.

出版信息

Int J Biol Macromol. 2023 Nov 1;251:126327. doi: 10.1016/j.ijbiomac.2023.126327. Epub 2023 Aug 12.

DOI:10.1016/j.ijbiomac.2023.126327
PMID:37579907
Abstract

Porcine deltacoronavirus (PDCoV) is an emerging swine enteropathogenic coronavirus that mainly threatens newborn piglets and poses a potential broad cross-species transmission risk. The antigenic epitopes of PDCoV are currently unidentified, and no information about T cell epitopes is available. Here, T-cell epitopes of PDCoV structural proteins were predicted using computational methods. 17 epitope peptides were synthesized and then screened using ELIspot, intracellular cytokine staining (ICS), and RT-qPCR detection of IFN-γ mRNA to evaluate their ability to elicit interferon-gamma (IFN-γ) responses in peripheral blood mononuclear cells (PBMCs) from PDCoV-challenged pigs. Five peptides (M1, M2, M3, N6, and S4) elicited high levels of IFN-γ and were investigated further as potential T-cell epitope candidates. All five peptides were cytotoxic T lymphocyte (CTL) epitopes, and two peptides (M3, N6) were recognized simultaneously by CD8 + and CD4 + T cells. A multi-epitope peptide combining the five epitopes (designated "5T") was synthesized and its immune response and protection efficacy was evaluated in a piglet model. ELISpot assay results indicated that 5T induces robust epitope-specific cellular immune responses. Four epitopes (M1, M2, N6, S4) elicited IFN-γ responses in 5T-vaccinated piglets. No obvious protection efficacy was detected in piglets vaccinated with 5T alone. Our results provide valuable information concerning PDCoV-related antigenic epitopes and will be useful in the design of epitope-based vaccines.

摘要

猪德尔塔冠状病毒(PDCoV)是一种新兴的猪肠道致病性冠状病毒,主要威胁新生仔猪,具有广泛的潜在跨种传播风险。PDCoV 的抗原表位目前尚未确定,也没有关于 T 细胞表位的信息。本研究采用计算方法预测 PDCoV 结构蛋白的 T 细胞表位。合成了 17 个表位肽,然后通过 ELIspot、细胞内细胞因子染色(ICS)和 IFN-γ mRNA 的 RT-qPCR 检测评估其在 PDCoV 攻毒猪外周血单个核细胞(PBMC)中诱导干扰素-γ(IFN-γ)反应的能力。5 个肽(M1、M2、M3、N6 和 S4)诱导高水平的 IFN-γ,并进一步作为潜在的 T 细胞表位候选物进行研究。这 5 个肽均为细胞毒性 T 淋巴细胞(CTL)表位,其中 2 个肽(M3、N6)同时被 CD8+和 CD4+T 细胞识别。合成了一个包含这 5 个表位的多表位肽(命名为“5T”),并在仔猪模型中评估了其免疫反应和保护效果。ELISpot 检测结果表明,5T 诱导了强烈的表位特异性细胞免疫反应。5T 疫苗接种仔猪中,4 个表位(M1、M2、N6、S4)可诱导 IFN-γ 应答。单独接种 5T 的仔猪未检测到明显的保护效果。本研究提供了与 PDCoV 相关的抗原表位的有价值信息,将有助于基于表位的疫苗的设计。

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