Rabie Amgad M, Abdalla Mohnad
Dr. Amgad Rabie's Research Lab. for Drug Discovery (DARLD), Mansoura City35511,Mansoura, Dakahlia Governorate, Egypt.
Head of Drug Discovery & Clinical Research Department, Dikernis General Hospital (DGH), Magliss El-Madina Street, Dikernis City35744,Dikernis, Dakahlia Governorate, Egypt.
ACS Bio Med Chem Au. 2022 Oct 24;2(6):565-585. doi: 10.1021/acsbiomedchemau.2c00039. eCollection 2022 Dec 21.
Lately, nucleos(t)ide antivirals topped the scene as top options for the treatment of coronavirus disease 2019 (COVID-19) caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection. Targeting the two broadly conserved SARS-CoV-2 enzymes, RNA-dependent RNA polymerase (RdRp) and 3'-to-5' exoribonuclease (ExoN), together using only one shot is a very successful new tactic to stop SARS-CoV-2 multiplication irrespective of the SARS-CoV-2 variant type. Herein, the current studies investigated most nucleoside analogue (NA) libraries, searching for the ideal drug candidates expectedly able to act through this double tactic. Gradual computational filtration gave rise to six different promising NAs along with their corresponding triphosphate (TP) nucleotides. The subsequent biological assessment proved for the first time that, among the six NAs, riboprine and forodesine are able to hyperpotently inhibit the replication of the Omicron strain of SARS-CoV-2 with extremely low anti-RdRp, anti-ExoN, and anti-SARS-CoV-2 EC values of about 0.18, 0.28, and 0.40 μM for riboprine and about 0.20, 0.31, and 0.65 μM for forodesine, respectively, surpassing remdesivir and molnupiravir. The significant probability that both compounds may also act as prodrugs for their final TP nucleotides pushed us to examine the same activities for forodesine-TP and riboprine-TP. Both nucleotides similarly displayed very promising results, respectively, which are much better than those for the two reference TP nucleotides, GS-443902 and β-d--hydroxycytidine 5'-TP (NHC-TP). The prior data supported these biochemical findings, suggesting that riboprine and forodesine molecules and their expected active TP metabolites strongly hit the key catalytic pockets of the SARS-CoV-2 RdRp's and ExoN's main active sites. In brief, the current important results of this comprehensive study revealed the interesting repurposing potentials of, mainly, the two bioactive nucleosides forodesine and riboprine and their TP nucleotides to effectively shut down the polymerase/exoribonuclease-RNA nucleotide interactions of SARS-CoV-2 and consequently treat COVID-19 infections.
最近,核苷(酸)类抗病毒药物成为治疗由严重急性呼吸综合征冠状病毒2(SARS-CoV-2)感染引起的2019冠状病毒病(COVID-19)的首选方案。仅通过一次给药同时靶向两种广泛保守的SARS-CoV-2酶,即RNA依赖性RNA聚合酶(RdRp)和3'-5'外切核糖核酸酶(ExoN),是一种非常成功的新策略,可阻止SARS-CoV-2增殖,而不论SARS-CoV-2变体类型如何。在此,当前的研究调查了大多数核苷类似物(NA)文库,寻找预期能够通过这种双重策略发挥作用的理想候选药物。逐步的计算筛选产生了六种不同的有前景的核苷类似物及其相应的三磷酸(TP)核苷酸。随后的生物学评估首次证明,在这六种核苷类似物中,利巴嘌呤和福多司坦能够高效抑制SARS-CoV-2奥密克戎毒株的复制,利巴嘌呤的抗RdRp、抗ExoN和抗SARS-CoV-2的半数有效浓度(EC)极低,分别约为0.18、0.28和0.40μM,福多司坦的相应数值分别约为0.20、0.31和0.65μM,超过了瑞德西韦和莫努匹拉韦。这两种化合物也可能作为其最终TP核苷酸的前药的显著可能性促使我们研究福多司坦-TP和利巴嘌呤-TP的相同活性。两种核苷酸同样分别显示出非常有前景的结果,比两种参考TP核苷酸,即GS-443902和β-D-羟基胞苷5'-TP(NHC-TP)的结果要好得多。先前的数据支持了这些生化研究结果,表明利巴嘌呤和福多司坦分子及其预期的活性TP代谢产物强烈作用于SARS-CoV-2 RdRp和ExoN主要活性位点的关键催化口袋。简而言之,这项综合研究的当前重要结果揭示了主要是两种生物活性核苷福多司坦和利巴嘌呤及其TP核苷酸在有效阻断SARS-CoV-2的聚合酶/外切核糖核酸酶-RNA核苷酸相互作用从而治疗COVID-19感染方面具有有趣的重新利用潜力。