• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

墨吉对虾响应溶蛋白弧菌感染的转录组分析

Transcriptome analysis of Fenneropenaeus merguiensis in response to Vibrio proteolyticus infection.

作者信息

Zhong Yunqi, He Zihao, Long Xinxin, Hou Danqing, Hu Xianye, Sun Chengbo

机构信息

College of Fisheries, Guangdong Ocean University, Zhanjiang, China.

Guangdong Provincial Key Laboratory of Pathogenic Biology and Epidemiology for Aquatic Economic Animals, Zhanjiang, China.

出版信息

J Fish Dis. 2023 Nov;46(11):1207-1224. doi: 10.1111/jfd.13840. Epub 2023 Aug 17.

DOI:10.1111/jfd.13840
PMID:37589383
Abstract

In recent years, due to the destruction of the culture environment and serious ecological pressure, especially in the process of culture, residual bait, faeces and fishery drug abuse will lead to the accumulation of harmful metabolites such as ammonia nitrogen and nitrite, and biological denitrification is the most economical and effective method to remove the single. Therefore, in this study, a nitrite removal strain XA19 was isolated and screened from a shrimp biofloc culture pond. This strain was identified as a clade of Vibrio proteolyticus because the homology between XA19 and V. proteolyticus WDVP was as high as 99.86% by using 16S rDNA gene sequence analysis and NCBI database comparison. Scanning electron microscopy images showed that V. proteolyticus is short-rod-shaped with a curved body and no budding spores, pods and flagella. Antimicrobial susceptibility test proved that V. proteolyticus was resistant to ampicillin, oxacillin, penicillin, vancomycin and clindamycin. In the median lethal concentration 50 (LC ) test, at 7-day post-infection (dpi), LC of V. proteolyticus for Fenneropenaeus merguiensis was 1.69 × 10  CFU/mL. Transcriptome sequencing analysis was carried out on hepatopancreas of F. merguiensis at 24 and 48 hpi. A total of 176 differentially expressed genes (DEGs) were screened at 24 hpi, including 104 up-regulated DEGs and 72 down-regulated DEGs, and a total of 52 DEGs were screened at 48 hpi, including 32 up-regulated DEGs and 20 down-regulated DEGs. In the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis of DEGs, many immune-related signalling pathways were significantly enriched, including Hippo signalling pathway, phagosome, Toll and Imd signalling pathways and Wnt signalling pathway. In addition, some pathways related to Warburg effect were also enriched, including Glycolysis/Gluconeogenesis, Biosynthesis of amino acids, amino sugar and nucleotide sugar metabolism and so on. In this study, the toxicity and drug sensitivity of V. proteolyticus were systematically studied, and the immune response of hepatopancreas of F. merguiensis to V. proteolyticus infection was preliminarily revealed from the molecular level. The results may provide a reference for the prevention and control of V. proteolyticus.

摘要

近年来,由于养殖环境遭到破坏以及面临严重的生态压力,尤其是在养殖过程中,残饵、粪便以及渔业药物滥用会导致氨氮和亚硝酸盐等有害代谢产物积累,而生物脱氮是去除单一有害物质最经济有效的方法。因此,在本研究中,从对虾生物絮团养殖池塘中分离筛选出一株亚硝酸盐去除菌株XA19。通过16S rDNA基因序列分析并与NCBI数据库比对,该菌株被鉴定为溶蛋白弧菌属的一个分支,因为XA19与溶蛋白弧菌WDVP的同源性高达99.86%。扫描电子显微镜图像显示,溶蛋白弧菌呈短杆状,菌体弯曲,无芽孢、荚膜和鞭毛。药敏试验证明,溶蛋白弧菌对氨苄西林、苯唑西林、青霉素、万古霉素和克林霉素耐药。在半数致死浓度50(LC₅₀)试验中,感染后7天(dpi),溶蛋白弧菌对墨吉对虾的LC₅₀为1.69×10⁹ CFU/mL。对墨吉对虾在感染后24小时和48小时的肝胰腺进行转录组测序分析。在感染后24小时共筛选出176个差异表达基因(DEGs),其中上调的DEGs有104个,下调的DEGs有72个;在感染后48小时共筛选出52个DEGs,其中上调的DEGs有32个,下调的DEGs有20个。在对DEGs进行京都基因与基因组百科全书(KEGG)通路富集分析时,许多免疫相关信号通路显著富集,包括Hippo信号通路、吞噬体、Toll和Imd信号通路以及Wnt信号通路。此外,一些与瓦伯格效应相关的通路也被富集,包括糖酵解/糖异生、氨基酸生物合成、氨基糖和核苷酸糖代谢等。本研究系统地研究了溶蛋白弧菌的毒性和药敏性,并从分子水平初步揭示了墨吉对虾肝胰腺对溶蛋白弧菌感染的免疫反应。研究结果可为溶蛋白弧菌的防控提供参考。

相似文献

1
Transcriptome analysis of Fenneropenaeus merguiensis in response to Vibrio proteolyticus infection.墨吉对虾响应溶蛋白弧菌感染的转录组分析
J Fish Dis. 2023 Nov;46(11):1207-1224. doi: 10.1111/jfd.13840. Epub 2023 Aug 17.
2
Pathogenicity and transcriptome analysis of a strain of Vibrio owensii in Fenneropenaeus merguiensis.对凡纳滨对虾致病性欧文氏弧菌的毒力和转录组分析。
Fish Shellfish Immunol. 2022 Nov;130:194-205. doi: 10.1016/j.fsi.2022.09.008. Epub 2022 Sep 7.
3
Pathogenicity and transcriptomic exploration of Vibrio fortis in Penaeus monodon.对凡纳滨对虾中强优势弧菌的致病性及转录组学研究。
Fish Shellfish Immunol. 2023 Nov;142:109097. doi: 10.1016/j.fsi.2023.109097. Epub 2023 Sep 24.
4
Gill transcriptomes reveal involvement of cytoskeleton remodeling and immune defense in ammonia stress response in the banana shrimp Fenneropenaeus merguiensis.吉尔转录组揭示了在氨应激反应中香蕉虾芒光对虾细胞骨架重塑和免疫防御的参与。
Fish Shellfish Immunol. 2017 Dec;71:319-328. doi: 10.1016/j.fsi.2017.10.028. Epub 2017 Oct 16.
5
Research into the hemocyte immune response of Fenneropenaeus merguiensis under decapod iridescent virus 1 (DIV1) challenge using transcriptome analysis.利用转录组分析研究感染十足目虹彩病毒1(DIV1)后墨吉对虾血细胞的免疫反应。
Fish Shellfish Immunol. 2020 Sep;104:8-17. doi: 10.1016/j.fsi.2020.05.053. Epub 2020 May 27.
6
Transcriptome profiling reveals the novel immunometabolism-related genes against WSSV infection from Fenneropenaeus merguiensis.转录组分析揭示了来自墨吉对虾的抗白斑综合征病毒感染的新型免疫代谢相关基因。
Fish Shellfish Immunol. 2022 Jan;120:31-44. doi: 10.1016/j.fsi.2021.11.006. Epub 2021 Nov 7.
7
Effects of Vibrio harveyi infection on the biochemistry, histology and transcriptome in the hepatopancreas of ivory shell (Babylonia areolata).哈维弧菌感染对象牙贝(Babylonia areolata)肝胰腺生化、组织学和转录组的影响。
Fish Shellfish Immunol. 2024 Oct;153:109856. doi: 10.1016/j.fsi.2024.109856. Epub 2024 Aug 22.
8
Transcriptome profiles of the clam Meretrix petechialis hepatopancreas in response to Vibrio infection.菲律宾蛤仔肝胰腺响应弧菌感染的转录组图谱
Fish Shellfish Immunol. 2017 Mar;62:175-183. doi: 10.1016/j.fsi.2017.01.024. Epub 2017 Jan 18.
9
The dynamic immune responses of Mandarin fish (Siniperca chuatsi) to ISKNV in early infection based on full-length transcriptome analysis and weighted gene co-expression network analysis.基于全长转录组分析和加权基因共表达网络分析的鳜鱼(Siniperca chuatsi)早期感染传染性脾肾坏死病毒(ISKNV)后的动态免疫反应
Fish Shellfish Immunol. 2022 Mar;122:191-205. doi: 10.1016/j.fsi.2022.02.017. Epub 2022 Feb 11.
10
Comparative transcriptomic analysis of shrimp hemocytes in response to acute hepatopancreas necrosis disease (AHPND) causing Vibrio parahemolyticus infection.对副溶血弧菌感染引起的急性肝胰腺坏死病(AHPND)虾血细胞的比较转录组学分析。
Fish Shellfish Immunol. 2018 Mar;74:10-18. doi: 10.1016/j.fsi.2017.12.032. Epub 2017 Dec 22.