Liu Zhiguo, Yuan Ye, Wang Lixin, Cao Haonan, Wang Chenyu, Zhao Xuan, Wang Lili, Liu Mengjun
Research Center of Chinese Jujube, Hebei Agricultural University, Baoding, Hebei, 071001, China.
College of Horticulture, Hebei Agricultural University, Baoding, Hebei, 071001, China.
Heliyon. 2023 Aug 2;9(8):e18612. doi: 10.1016/j.heliyon.2023.e18612. eCollection 2023 Aug.
Adenylate cyclase is the key enzyme in the synthesis of cAMP. Now, more and more plant genes which possessing AC function are being identified, but the classification of plant ACs has not yet been systematically studied and the relationship of plant ACs with other existing six classes ACs in animals and microorganisms is still unclear. In this study, we found that 7 of the 15 reported plant ACs with conserved CYTH-like_AC_Ⅳ-like domain were clustered into a group with high confidence (Group Ⅳ), while the other plant ACs were clustered into other three groups with no common domain. In addition, we also found that the Group Ⅳ plant ACs were grouped into an independent and specific class (Class VII), separated from the existing six classes of ACs. The Group Ⅳ plant ACs, compared to the existing six classes of ACs, own unique CYTH-like_AC_Ⅳ-like conserved domain and EXEXK signature motif, characteristic protein tertiary structures, specific subcellular localization and catalytic conditions. In view of the above, we regarded the Group Ⅳ plant ACs as the seventh class of AC (VII AC). This study does the systematic classification of plant ACs which could lay a foundation for further identification and study of the biological functions of the plant-specific VII ACs.
腺苷酸环化酶是合成环磷酸腺苷(cAMP)的关键酶。目前,越来越多具有AC功能的植物基因被鉴定出来,但植物ACs的分类尚未得到系统研究,植物ACs与动物和微生物中现有的其他六类ACs之间的关系仍不明确。在本研究中,我们发现,15个已报道的具有保守的类CYTH_AC_Ⅳ样结构域的植物ACs中有7个被高度可信地聚类为一组(第四组),而其他植物ACs则被聚类为其他三组,且没有共同结构域。此外,我们还发现第四组植物ACs被归为一个独立且特定的类别(第七类),与现有的六类ACs分开。与现有的六类ACs相比,第四组植物ACs具有独特的类CYTH_AC_Ⅳ样保守结构域和EXEXK特征基序、特征性蛋白质三级结构、特定的亚细胞定位和催化条件。鉴于上述情况,我们将第四组植物ACs视为第七类AC(VII AC)。本研究对植物ACs进行了系统分类,可为进一步鉴定和研究植物特有的VII ACs的生物学功能奠定基础。