Department of Neurosurgery, The Second Affiliated Hospital of Nanchang University, Nanchang, Jiangxi 330006, China.
Second College of Clinical Medicine, Nanchang University, Nanchang, Jiangxi 330047, China.
Aging (Albany NY). 2023 Aug 18;15(16):8155-8184. doi: 10.18632/aging.204962.
Glioma is the most common primary intracranial tumor in the central nervous system, with a high degree of malignancy and poor prognosis, easy to recur, difficult to cure. The mutation of Retinitis Pigmentosa 2 (RP2) can cause retinitis pigmentosa, it is a prognostic factor of osteosarcoma, however, its role in glioma remains unclear. Based on the data from TCGA and GTEx, we identified RP2 as the most related gene for glioma by WGCNA, and used a series of bioinformatics analyses including LinkedOmics, GSCA, CTD, and so on, to explore the expression of RP2 in glioma and the biological functions it is involved in. The results showed that RP2 was highly expressed in glioma, and its overexpression could lead to poor prognosis. In addition, the results of enrichment analysis showed that RP2 was highly correlated with cell proliferation and immune response. And then, we found significant enrichment of Macrophages among immune cells. Furthermore, our experiments have confirmed that Macrophages can promote the development of glioma by secreting or influencing the secretion of some cytokines. Moreover, we investigated the influence of RP2 on the immunotherapy of glioma and the role of m6A modification in the influence of RP2 on glioma. Ultimately, we determined that RP2 is an independent prognostic factor that is mainly closely related to immune for glioma.
神经胶质瘤是中枢神经系统最常见的原发性颅内肿瘤,具有高度恶性和预后不良的特点,易复发,难以治愈。视网膜色素变性 2 型(RP2)的突变可引起视网膜色素变性,它是骨肉瘤的预后因素,但在神经胶质瘤中的作用尚不清楚。基于 TCGA 和 GTEx 的数据,我们通过 WGCNA 确定 RP2 是与神经胶质瘤最相关的基因,并使用一系列生物信息学分析,包括 LinkedOmics、GSCA、CTD 等,探讨 RP2 在神经胶质瘤中的表达及其参与的生物学功能。结果表明,RP2 在神经胶质瘤中高表达,其过表达可导致不良预后。此外,富集分析结果表明,RP2 与细胞增殖和免疫反应高度相关。然后,我们发现免疫细胞中巨噬细胞显著富集。此外,我们的实验已经证实巨噬细胞可以通过分泌或影响某些细胞因子的分泌来促进神经胶质瘤的发展。此外,我们还研究了 RP2 对神经胶质瘤免疫治疗的影响以及 m6A 修饰在 RP2 对神经胶质瘤影响中的作用。最终,我们确定 RP2 是一个独立的预后因素,主要与免疫有关,对神经胶质瘤有影响。