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谷氨酸有助于揭示亚饱和溶液中FET家族蛋白相分离与聚集驱动力的差异。

Glutamate helps unmask the differences in driving forces for phase separation versus clustering of FET family proteins in sub-saturated solutions.

作者信息

Kar Mrityunjoy, Vogel Laura T, Chauhan Gaurav, Ausserwöger Hannes, Welsh Timothy J, Kamath Anjana R, Knowles Tuomas P J, Hyman Anthony A, Seidel Claus A M, Pappu Rohit V

出版信息

bioRxiv. 2023 Aug 13:2023.08.11.552963. doi: 10.1101/2023.08.11.552963.

Abstract

Multivalent proteins undergo coupled segregative and associative phase transitions. Phase separation, a segregative transition, is driven by macromolecular solubility, and this leads to coexisting phases above system-specific saturation concentrations. Percolation is a continuous transition that is driven by multivalent associations among cohesive motifs. Contributions from percolation are highlighted by the formation of heterogeneous distributions of clusters in sub-saturated solutions, as was recently reported for Fused in sarcoma (FUS) and FET family proteins. Here, we show that clustering and phase separation are defined by a separation of length- and energy-scales. This is unmasked when glutamate is the primary solution anion. Glutamate is preferentially excluded from protein sites, and this enhances molecular associations. Differences between glutamate and chloride are manifest at ultra-low protein concentrations. These differences are amplified as concentrations increase, and they saturate as the micron-scale is approached. Therefore, condensate formation in supersaturated solutions and clustering in sub-saturated are governed by distinct energy and length scales. Glutamate, unlike chloride, is the dominant intracellular anion, and the separation of scales, which is masked in chloride, is unmasked in glutamate. Our work highlights how components of cellular milieus and sequence-encoded interactions contribute to amplifying distinct contributions from associative versus segregative phase transitions.

摘要

多价蛋白质经历耦合的分离和缔合相变。相分离是一种分离转变,由大分子溶解度驱动,这导致在系统特定的饱和浓度以上出现共存相。渗流是一种由粘性基序之间的多价缔合驱动的连续转变。如最近关于肉瘤融合蛋白(FUS)和FET家族蛋白的报道,亚饱和溶液中簇的异质分布的形成突出了渗流的贡献。在这里,我们表明聚集和相分离是由长度尺度和能量尺度的分离定义的。当谷氨酸是主要的溶液阴离子时,这一点就会显现出来。谷氨酸优先被排除在蛋白质位点之外,这增强了分子缔合。谷氨酸和氯离子之间的差异在超低蛋白质浓度下就很明显。随着浓度增加,这些差异会放大,并且在接近微米尺度时达到饱和。因此,过饱和溶液中的凝聚物形成和亚饱和溶液中的聚集受不同的能量和长度尺度控制。与氯离子不同,谷氨酸是主要的细胞内阴离子,在氯离子中被掩盖的尺度分离在谷氨酸中显现出来。我们的工作突出了细胞环境的成分和序列编码的相互作用如何有助于放大缔合相变与分离相变的不同贡献。

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