Rozenfel'd M A, Gershkovich K B, Kuznetsov D V, Meshkov B B, Gontar' I D
Mol Biol (Mosk). 1986 Jul-Aug;20(4):1098-110.
Three-dimensional organization of intermediate soluble forms of fibrin-polymers--a product of fibrin-monomer assembly--in the presence of non-denaturating urea concentrations has been studied. Hydrodynamic parameters of fibrinogen and fibrin-polymers were obtained by viscosimetry, dynamic light scattering and analytic ultracentrifugation. Using Yamakawa's hydrodynamic theory and considering fibrinogen molecule as an oblate ellipsoid of revolution made it possible to estimate the concentration effect on the coefficient of translational friction in the first, according to concentration, linear approximation. Hydrodynamic constants against polymer molecular weights were plotted using Swedberg's and Kuhn--Mark's equation. This made it possible to prove the existence of equilibrium single-stranded protofibrils formed by fibrin-monomer "end-to-end" association. It was concluded that local conformational transformations in fibrin-monomer molecule result in diminishing the complementarity of lateral binding sites; less specific D--D contacts remaining the only means of the "end-to-end" association. Experimentally obtained data give evidence that polymerization region is shifted towards much lower urea concentration, fibrinopeptide B being preserved. Therefore, the possibility of several conformational states of protein molecules during fibrinogen--fibrin transformation is discussed. It is supposed that changes in structure concern not only the central E-, but also the peripheral D- or alpha C-domains.
研究了在非变性尿素浓度存在下,纤维蛋白聚合物中间可溶性形式(纤维蛋白单体组装产物)的三维组织。通过粘度测定、动态光散射和分析超速离心获得纤维蛋白原和纤维蛋白聚合物的流体动力学参数。利用山川流体动力学理论并将纤维蛋白原分子视为扁旋转椭球体,使得能够在根据浓度的第一个线性近似中估计浓度对平移摩擦系数的影响。使用斯韦德贝里方程和库恩 - 马克方程绘制流体动力学常数与聚合物分子量的关系图。这使得能够证明由纤维蛋白单体“端对端”缔合形成的平衡单链原纤维的存在。得出的结论是,纤维蛋白单体分子中的局部构象转变导致侧向结合位点的互补性降低;特异性较低的D - D接触仍然是“端对端”缔合的唯一方式。实验获得的数据表明,在纤维蛋白肽B保留的情况下,聚合区域向低得多的尿素浓度移动。因此,讨论了纤维蛋白原 - 纤维蛋白转化过程中蛋白质分子几种构象状态的可能性。据推测,结构变化不仅涉及中央E - 结构域,还涉及外周D - 或αC - 结构域。