Institute of Physics, Polish Academy of Sciences, 02-668 Warsaw, Poland.
Institute of Chemistry of Organometallic Compounds, National Research Council, 50019 Sesto Fiorentino, Italy.
Int J Mol Sci. 2023 Aug 11;24(16):12698. doi: 10.3390/ijms241612698.
Charge polarization at the membrane interface is a fundamental process in biology. Despite the lower concentration compared to the abundant monovalent ions, the relative abundance of divalent cations (Ca, Mg, Zn, Fe, Cu) in particular spaces, such as the neuron synapse, raised many questions on the possible effects of free multivalent ions and of the required protection of membranes by the eventual defects caused by the free forms of the cations. In this work, we first applied a recent realistic model of divalent cations to a well-investigated model of a polar lipid bilayer, di-myristoyl phosphatidyl choline (DMPC). The full atomistic model allows a fairly good description of changes in the hydration of charged and polar groups upon the association of cations to lipid atoms. The lipid-bound configurations were analyzed in detail. In parallel, amyloid-β 1-42 (Aβ42) peptides assembled into tetramers were modeled at the surface of the same bilayer. Two of the protein tetramers' models were loaded with four Cu ions, the latter bound as in DMPC-free Aβ42 oligomers. The two Cu-bound models differ in the binding topology: one with each Cu ion binding each of the monomers in the tetramer; one with pairs of Cu ions linking two monomers into dimers, forming tetramers as dimers of dimers. The models here described provide hints on the possible role of Cu ions in synaptic plasticity and of Aβ42 oligomers in storing the same ions away from lipids. The release of structurally disordered peptides in the synapse can be a mechanism to recover ion homeostasis and lipid membranes from changes in the divalent cation concentration.
在生物学中,膜界面的电荷极化是一个基本过程。尽管与丰富的单价离子相比,二价阳离子(Ca、Mg、Zn、Fe、Cu 等)的浓度较低,但它们在特定空间(如神经元突触)的相对丰度,引发了人们对游离多价离子可能产生的影响,以及游离形式的阳离子可能导致的膜缺陷所需的保护的诸多疑问。在这项工作中,我们首先将最近提出的二价阳离子的现实模型应用于一个研究充分的极性脂质双层模型,即二肉豆蔻酰磷脂酰胆碱(DMPC)。全原子模型可以很好地描述在阳离子与脂质原子结合时,带电和极性基团的水合变化。详细分析了与脂质结合的构型。与此同时,在相同的双层表面模拟了组装成四聚体的淀粉样β 1-42(Aβ42)肽。两个蛋白质四聚体模型分别加载了四个 Cu 离子,这些 Cu 离子的结合方式与 DMPC 中无 Aβ42 寡聚物中的结合方式相同。两个 Cu 结合的模型在结合拓扑上有所不同:一个模型中,每个 Cu 离子与四聚体中的每个单体结合;另一个模型中,Cu 离子对将两个单体连接成二聚体,形成由二聚体组成的四聚体。这里描述的模型为 Cu 离子在突触可塑性中的可能作用以及 Aβ42 寡聚物在将相同离子从脂质中隔离储存提供了线索。在突触中释放结构无序的肽可能是一种从二价阳离子浓度变化中恢复离子平衡和脂质膜的机制。