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先天性白内障家族中 突变的鉴定与功能特征分析

Identification and Functional Characterization of Mutation in in Families with Congenital Cataract.

作者信息

Ullah Muhammad Ikram, Rehman Zaira, Dad Rubina, Alsrhani Abdullah, Shakil Muhammad, Ghanem Heba Bassiony, Alameen Ayman Ali Mohammed, Elsadek Mohamed Farouk, Eltayeb Lienda Bashier, Ullah Sajjad, Atif Muhammad

机构信息

Department of Clinical Laboratory Sciences, College of Applied Medical Sciences, Jouf University, Sakaka 72388, Saudi Arabia.

Department of Pathology, Indus Hospital & Health Network, Karachi 75190, Pakistan.

出版信息

Life (Basel). 2023 Aug 21;13(8):1788. doi: 10.3390/life13081788.

Abstract

Congenital cataract (CC) causes a third of the cases of treatable childhood blindness worldwide. CC is a disorder of the crystalline lens which is established as clinically divergent and has complex heterogeneity. This study aimed to determine the genetic basis of CC. Whole blood was obtained from four consanguineous families with CC. Genomic DNA was extracted from the blood, and the combination of targeted and Sanger sequencing was used to identify the causative gene. The mutations detected were analyzed in silico for structural and protein-protein interactions to predict their impact on protein activities. The sequencing found a known mutation (c.2206C>T; p.Gln736Term) in autosomal recessive mode in families with CC. Co-segregation analysis showed affected individuals as homozygous and carriers as heterozygous for the mutation and the unaffected as wild-type. Bioinformatics tools uncovered the loss of the Znf domain and structural compactness of the mutant protein. In conclusion, a previously reported nonsense mutation was identified in four consanguineous families with CC. Structural analysis predicted the protein as disordered and coordinated with other structural proteins. The autophagy process was found to be significant for the development of the lens and maintenance of its transparency. The identification of these markers expands the scientific knowledge of CC; the future goal should be to understand the mechanism of disease severity. Ascertaining the genetic etiology of CC in a family member facilitates establishing a molecular diagnosis, unlocks the prospect of prenatal diagnosis in pregnancies, and guides the successive generations by genetic counseling.

摘要

先天性白内障(CC)在全球范围内导致了三分之一可治疗的儿童失明病例。CC是一种晶状体疾病,临床上表现各异且具有复杂的异质性。本研究旨在确定CC的遗传基础。从四个患有CC的近亲家庭采集全血。从血液中提取基因组DNA,并使用靶向测序和桑格测序相结合的方法来鉴定致病基因。对检测到的突变进行计算机结构分析和蛋白质-蛋白质相互作用分析,以预测它们对蛋白质活性的影响。测序发现,在患有CC的家庭中,一个已知突变(c.2206C>T;p.Gln736Term)以常染色体隐性模式存在。共分离分析显示,受影响个体为该突变的纯合子,携带者为杂合子,未受影响个体为野生型。生物信息学工具揭示了突变蛋白锌指结构域的缺失和结构紧凑性的丧失。总之,在四个患有CC的近亲家庭中鉴定出了一个先前报道的无义突变。结构分析预测该蛋白质无序,并与其他结构蛋白相互协调。发现自噬过程对晶状体的发育及其透明度的维持具有重要意义。这些标记物的鉴定扩展了对CC的科学认识;未来的目标应该是了解疾病严重程度的机制。确定家庭成员中CC的遗传病因有助于进行分子诊断,开启孕期产前诊断的前景,并通过遗传咨询指导后代。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c368/10456301/521c8f18bee1/life-13-01788-g001.jpg

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