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降解萘和十二烷的sp. 菌株OVF7的基因组分析与生理学

Genome Analysis and Physiology of sp. Strain OVF7 Degrading Naphthalene and -Dodecane.

作者信息

Ivanova Anastasia A, Sazonova Olesya I, Zvonarev Anton N, Delegan Yanina A, Streletskii Rostislav A, Shishkina Lidia A, Bogun Alexander G, Vetrova Anna A

机构信息

Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", 142290 Pushchino, Russia.

State Research Center for Applied Microbiology and Biotechnology, 142279 Obolensk, Russia.

出版信息

Microorganisms. 2023 Aug 10;11(8):2058. doi: 10.3390/microorganisms11082058.

Abstract

The complete genome of the naphthalene- and -alkane-degrading strain sp. strain OVF7 was collected and analyzed. Clusters of genes encoding enzymes for the degradation of naphthalene and -alkanes are localized on the chromosome. Based on the Average Nucleotide Identity and digital DNA-DNA Hybridization compared with type strains of the group of fluorescent pseudomonads, the bacterium studied probably belongs to a new species. Using light, fluorescent, and scanning electron microscopy, the ability of the studied bacterium to form biofilms of different architectures when cultured in liquid mineral medium with different carbon sources, including naphthalene and -dodecane, was demonstrated. When grown on a mixture of naphthalene and -dodecane, the strain first consumed naphthalene and then -dodecane. Cultivation of the strain on -dodecane was characterized by a long adaptation phase, in contrast to cultivation on naphthalene and a mixture of naphthalene and -dodecane.

摘要

收集并分析了萘和烷烃降解菌株OVF7的全基因组。编码萘和烷烃降解酶的基因簇位于染色体上。基于与荧光假单胞菌群模式菌株相比的平均核苷酸同一性和数字DNA-DNA杂交分析,所研究的细菌可能属于一个新物种。利用光学显微镜、荧光显微镜和扫描电子显微镜,证明了所研究的细菌在含有不同碳源(包括萘和十二烷)的液体矿物培养基中培养时形成不同结构生物膜的能力。当在萘和十二烷的混合物上生长时,该菌株先消耗萘,然后消耗十二烷。与在萘以及萘和十二烷混合物上的培养相比,该菌株在十二烷上培养的特点是适应期较长。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fee/10458186/2d653d230a9c/microorganisms-11-02058-g001.jpg

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