Michel Matthew E, Wen Christopher C, Yee Sook Wah, Giacomini Kathleen M, Hamdoun Amro, Nicklisch Sascha C T
Department of Environmental Toxicology, University of California, Davis, Davis, California, USA.
Genentech, San Francisco, California, USA.
Clin Pharmacol Ther. 2023 Dec;114(6):1293-1303. doi: 10.1002/cpt.3036. Epub 2023 Sep 12.
Environmental health science seeks to predict how environmental toxins, chemical toxicants, and prescription drugs accumulate and interact within the body. Xenobiotic transporters of the ATP-binding cassette (ABC) and solute carrier (SLC) superfamilies are major determinants of the uptake and disposition of xenobiotics across the kingdoms of life. The goal of this study was to integrate drug and environmental chemical interactions of mammalian ABC and SLC proteins in a centralized, integrative database. We built upon an existing publicly accessible platform-the "TransPortal"-which was updated with novel data and searchable features on transporter-interfering chemicals from manually curated literature data. The integrated resource TransPortal-TICBase (https://transportal.compbio.ucsf.edu) now contains information on 46 different mammalian xenobiotic transporters of the ABC- and SLC-type superfamilies, including 13 newly added rodent and 2 additional human drug transporters, 126 clinical drug-drug interactions, and a more than quadrupled expansion of the initial in vitro chemical interaction data from 1,402 to 6,296 total interactions. Based on our updated database, environmental interference with major human and rodent drug transporters occurs across the ABC- and SLC-type superfamilies, with kinetics indicating that some chemicals, such as the ionic liquid 1-hexylpyridinium chloride and the antiseptic chlorhexidine, can act as strong inhibitors with potencies similar or even higher than pharmacological model inhibitors. The new integrated web portal serves as a central repository of current and emerging data for interactions of prescription drugs and environmental chemicals with human drug transporters. This archive has important implications for predicting adverse drug-drug and drug-environmental chemical interactions and can serve as a reference website for the broader scientific community of clinicians and researchers.
环境卫生科学旨在预测环境毒素、化学毒物和处方药如何在体内积累和相互作用。ATP结合盒(ABC)和溶质载体(SLC)超家族的外源性物质转运蛋白是生命各王国中外源性物质摄取和处置的主要决定因素。本研究的目的是将哺乳动物ABC和SLC蛋白的药物与环境化学相互作用整合到一个集中的综合数据库中。我们基于现有的可公开访问的平台——“转运门户”(TransPortal)进行构建,该平台通过来自人工整理文献数据的关于转运蛋白干扰化学物质的新数据和可搜索功能进行了更新。整合后的资源TransPortal-TICBase(https://transportal.compbio.ucsf.edu)现在包含有关ABC和SLC型超家族的46种不同哺乳动物外源性物质转运蛋白的信息,包括13种新添加的啮齿动物和2种额外的人类药物转运蛋白、126种临床药物 - 药物相互作用,以及初始体外化学相互作用数据从1402种相互作用到总共6296种相互作用的四倍多的扩展。基于我们更新后的数据库,对主要人类和啮齿动物药物转运蛋白的环境干扰发生在ABC和SLC型超家族中,动力学表明一些化学物质,如离子液体1 - 己基吡啶氯化物和防腐剂洗必泰,可以作为强效抑制剂,其效力与药理学模型抑制剂相似甚至更高。新的综合门户网站作为处方药和环境化学物质与人类药物转运蛋白相互作用的当前和新出现数据的中央存储库。这个存档对于预测不良药物 - 药物和药物 - 环境化学相互作用具有重要意义,并且可以作为临床医生和研究人员更广泛科学界的参考网站。