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转录组测序分析揭示了大豆发酵粉对 LPS 感染泥鳅的免疫机制。

The transcriptome sequencing analysis reveals immune mechanisms of soybean fermented powder on the loach () in response to Lipopolysaccharide (LPS) infection.

机构信息

Institute of Agro-Products Processing, Anhui Academy of Agricultural Sciences, Hefei, China.

Anhui Engineering Laboratory of Food Microbial Fermentation and Functional Application, Hefei, China.

出版信息

Front Immunol. 2023 Aug 18;14:1247038. doi: 10.3389/fimmu.2023.1247038. eCollection 2023.

DOI:10.3389/fimmu.2023.1247038
PMID:37662918
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10471800/
Abstract

The loach (), a small commercial fish that is widely cultivated for its high-quality protein, vitamins, minerals, and essential amino acid, is a member of the genus and the family Cyprinidae. In this study, we gave the LPS-injected loach fermented soybean meal and used transcriptome sequencing to investigate the impact of the fermented soybean powder on the loach's immune system. 3384 up-regulated genes and 12116 down-regulated genes were found among the 15500 differentially expressed genes, according to the results. The differentially expressed genes were shown to be involved in cellular processes, metabolic processes, cellular anatomical entities, and binding, according to the Go functional annotation. Meanwhile, the KEGG enrichment analysis indicated that the soybean fermented powder treated groups showed significant differences in DNA replication, Nucleotide excision repair, Fanconi anemia pathway, and Base excision repair pathways, suggesting that these pathways are closely related to the enhancement of the immune function of loach by soybean fermented powder. The particular conclusions not exclusively can provide a new conception for the rational utilization of soybean fermented powder but also can provide theoretical guidance for the subsequent healthy breeding of loach.

摘要

泥鳅()是一种小型商业鱼类,因其高蛋白、维生素、矿物质和必需氨基酸而被广泛养殖。在本研究中,我们给 LPS 注射的泥鳅投喂发酵豆粕,并使用转录组测序来研究发酵豆粉对泥鳅免疫系统的影响。根据结果,在 15500 个差异表达基因中发现了 3384 个上调基因和 12116 个下调基因。GO 功能注释显示,差异表达基因参与细胞过程、代谢过程、细胞解剖实体和结合。同时,KEGG 富集分析表明,大豆发酵粉处理组在 DNA 复制、核苷酸切除修复、范可尼贫血途径和碱基切除修复途径方面表现出显著差异,表明这些途径与大豆发酵粉增强泥鳅免疫功能密切相关。这些具体结论不仅可以为合理利用大豆发酵粉提供新的思路,也可以为后续泥鳅的健康养殖提供理论指导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/9deeb94cd77b/fimmu-14-1247038-g012.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/8d5bd7e9a4e0/fimmu-14-1247038-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/c2e5f6ea384f/fimmu-14-1247038-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/626290425ad2/fimmu-14-1247038-g009.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/da9873914c5c/fimmu-14-1247038-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/9deeb94cd77b/fimmu-14-1247038-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/938e3fd964f0/fimmu-14-1247038-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/f99cfdaa4239/fimmu-14-1247038-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/f6e0560afe7c/fimmu-14-1247038-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/df5f3872211f/fimmu-14-1247038-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/e8ab03076cc1/fimmu-14-1247038-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/a288777a60c8/fimmu-14-1247038-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/8d5bd7e9a4e0/fimmu-14-1247038-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/c2e5f6ea384f/fimmu-14-1247038-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/626290425ad2/fimmu-14-1247038-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/eeb56824cd79/fimmu-14-1247038-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/da9873914c5c/fimmu-14-1247038-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d41/10471800/9deeb94cd77b/fimmu-14-1247038-g012.jpg

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