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多组学研究利用斑马鱼揭示了病因不明的慢性肾脏病(CKDu)发病机制的潜在机制。

Multi-omics reveal mechanisms underlying chronic kidney disease of unknown etiology (CKDu) pathogenesis using zebrafish.

机构信息

Key Laboratory of Hydraulic and Waterway Engineering of the Ministry of Education, School of River and Ocean Engineering, Chongqing Jiaotong University, Chongqing 400074, China; Chongqing Institute of Green and Intelligent Technology, Chongqing School of University of Chinese Academy of Sciences, Chinese Academy of Sciences, Chongqing, 400714, China.

School of Public Health, Chongqing Medical University, Chongqing, 400016, China.

出版信息

Environ Pollut. 2023 Nov 15;337:122524. doi: 10.1016/j.envpol.2023.122524. Epub 2023 Sep 6.

DOI:10.1016/j.envpol.2023.122524
PMID:37683759
Abstract

Chronic kidney disease of unknown etiology (CKDu) is an endemic disease in the dry zone of farming communities, Sri Lanka. The drinking water in a CKDu prevalent area contains a high concentration of F, hardness and other environmental pollutants, including heavy metals and microcystin, which are considered possible etiology of CKDu in these areas. Here, multi-omics data with host transcriptome, metabolome and gut microbiomes were obtained using simulated local drinking water of Sri Lanka after their exposure to adult zebrafish. Based on an integrated multi-omics analysis in the context of host physiology in the kidney injury samples with different pathologic grades, two common pathways necroptosis and purine metabolism were identified as potentially important pathways that affect kidney injury. The key metabolite acetyl adenylate in the purine metabolism pathway was significantly positively correlated with Comamonas (rho = 0.72) and significantly negatively correlated with Plesiomonas (rho = -0.58). This crucial metabolite and two key gut bacteria genera may not only be potential markers but also potential therapeutic targets in the uric acid metabolic pathway, which is an important factor in the pathogenesis of acute kidney injury (AKI) in general, as well as of chronic kidney disease (CKD). Based on this, we revealed the urea metabolism pathway of kidney injury in zebrafish and provided a new avenue for the treatment of CKDu in Sri Lanka.

摘要

原因不明的慢性肾病(CKDu)是斯里兰卡干旱地区农耕社区的地方病。CKDu 流行地区的饮用水含有高浓度的氟、硬度和其他环境污染物,包括重金属和微囊藻毒素,这些被认为是这些地区 CKDu 的可能病因。在这里,使用模拟的当地饮用水对成年斑马鱼进行暴露后,获得了宿主转录组、代谢组和肠道微生物组的多组学数据。基于不同病理分级的肾脏损伤样本中宿主生理学的综合多组学分析,鉴定出两个常见的途径:坏死性凋亡和嘌呤代谢,这两个途径可能是影响肾脏损伤的重要途径。嘌呤代谢途径中的关键代谢物乙酰腺嘌呤与 Comamonas(rho=0.72)呈显著正相关,与 Plesiomonas(rho=-0.58)呈显著负相关。这种关键代谢物和两种关键肠道细菌属不仅可能是潜在的标志物,而且可能是尿酸代谢途径的潜在治疗靶点,尿酸代谢途径是急性肾损伤(AKI)以及慢性肾病(CKD)发病机制中的一个重要因素。基于这一点,我们揭示了斑马鱼肾脏损伤的尿素代谢途径,并为治疗斯里兰卡的 CKDu 提供了新的途径。

相似文献

1
Multi-omics reveal mechanisms underlying chronic kidney disease of unknown etiology (CKDu) pathogenesis using zebrafish.多组学研究利用斑马鱼揭示了病因不明的慢性肾脏病(CKDu)发病机制的潜在机制。
Environ Pollut. 2023 Nov 15;337:122524. doi: 10.1016/j.envpol.2023.122524. Epub 2023 Sep 6.
2
Metabolome evidence of CKDu risks after chronic exposure to simulated Sri Lanka drinking water in zebrafish.斑马鱼慢性暴露于模拟斯里兰卡饮用水后 CKDu 风险的代谢组学证据。
Ecotoxicol Environ Saf. 2024 Mar 15;273:116149. doi: 10.1016/j.ecoenv.2024.116149. Epub 2024 Feb 26.
3
Quest to identify geochemical risk factors associated with chronic kidney disease of unknown etiology (CKDu) in an endemic region of Sri Lanka-a multimedia laboratory analysis of biological, food, and environmental samples.在斯里兰卡一个地方病流行地区探寻与病因不明的慢性肾脏病(CKDu)相关的地球化学风险因素——对生物、食物和环境样本的多媒体实验室分析
Environ Monit Assess. 2016 Oct;188(10):548. doi: 10.1007/s10661-016-5524-8. Epub 2016 Sep 3.
4
The water chemistry and microbiome of household wells in Medawachchiya, Sri Lanka, an area with high prevalence of chronic kidney disease of unknown origin (CKDu).斯里兰卡迈达瓦奇亚家庭水井的水化学和微生物组,该地区慢性病因不明肾病(CKDu)的患病率很高。
Sci Rep. 2020 Oct 26;10(1):18295. doi: 10.1038/s41598-020-75336-7.
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Elucidating environmental factors and their combined effects on CKDu in Sri Lanka using zebrafish.利用斑马鱼阐明斯里兰卡环境因素及其对慢性肾脏病的综合影响。
Environ Pollut. 2023 Sep 1;332:121967. doi: 10.1016/j.envpol.2023.121967. Epub 2023 Jun 6.
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Exposure to Sri Lanka's local groundwater in a CKDu prevalent area causes kidney damage in zebrafish.暴露于 CKDu 流行地区的斯里兰卡当地地下水会导致斑马鱼的肾脏损伤。
Aquat Toxicol. 2022 Oct;251:106276. doi: 10.1016/j.aquatox.2022.106276. Epub 2022 Aug 23.
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Impact of water quality on Chronic Kidney Disease of unknown etiology (CKDu) in Thunukkai Division in Mullaitivu District, Sri Lanka.水质对斯里兰卡 Mullaitivu 区 Thunukkai 分区不明病因慢性肾脏病(CKDu)的影响。
BMC Nephrol. 2020 Nov 25;21(1):507. doi: 10.1186/s12882-020-02157-1.
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Evaluation of groundwater quality and reverse osmosis water treatment plants in the endemic areas of Chronic Kidney Disease of Unknown Etiology (CKDu) in Sri Lanka.评估斯里兰卡不明原因慢性肾病(CKDu)流行地区的地下水水质和反渗透水处理厂。
Sci Total Environ. 2020 Nov 25;745:140716. doi: 10.1016/j.scitotenv.2020.140716. Epub 2020 Jul 8.
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Significance of Mg-hardness and fluoride in drinking water on chronic kidney disease of unknown etiology in Monaragala, Sri Lanka.饮用水中镁硬度和氟化物对斯里兰卡莫拉格阿莱慢性病因未知肾病的意义。
Environ Res. 2022 Jan;203:111779. doi: 10.1016/j.envres.2021.111779. Epub 2021 Jul 30.
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Drinking water quality and chronic kidney disease of unknown etiology (CKDu): synergic effects of fluoride, cadmium and hardness of water.饮用水水质与病因不明的慢性肾脏病(CKDu):氟化物、镉和水硬度的协同作用
Environ Geochem Health. 2016 Feb;38(1):157-68. doi: 10.1007/s10653-015-9699-7. Epub 2015 Apr 10.

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