Ganzinelli Monica, Guffanti Federica, Ianza Anna, Sobhani Navid, Crovella Sergio, Zanconati Fabrizio, Bottin Cristina, Confalonieri Marco, Fumagalli Stefano, Guglielmi Alessandra, Generali Daniele, Damia Giovanna
Unit of Thoracic Oncology, Department of Medical Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori, 20133 Milan, Italy.
Laboratory of Preclinical Gynecological Oncology, Department of Experimental Oncology, Istituto di Ricerche Farmacologiche Mario Negri IRCCS, 20156 Milan, Italy.
Cancers (Basel). 2023 Aug 29;15(17):4309. doi: 10.3390/cancers15174309.
DNA repair has an important role in malignant pleural mesothelioma (MPM) tumorigenesis and progression. Prognostic/predictive biomarkers for better management of MPM patients are needed. In the present manuscript, we analyzed the expression of more than 700 genes in a cohort of MPM patients to possibly find biomarkers correlated with survival.
A total of 54 MPM patients, all with epithelioid histology, whose survival follow-up and formalin-fixed paraffin-embedded tumors were available, were included in the study. Gene expression profiles were evaluated using a Nanostring platform analyzing 760 genes involved in different cellular pathways. The percentages of proliferating tumor cells positive for RAD51 and BRCA1 foci were evaluated using an immunofluorescence assay, as a readout of homologous recombination repair status.
Patient median survival time was 16.9 months, and based on this value, they were classified as long and short survivors (LS/SS) with, respectively, an overall survival ≥ and <16.9 months as well as very long and very short survivors (VLS/VSS) with an overall survival ≥ than 33.8 and < than 8.45 months. A down-regulation in the DNA damage/repair expression score was observed in LS and VLS as compared to SS and VSS. These findings were validated by the lower number of both RAD51 and BRCA1-positive tumor cells in VLS as compared to VSS.
The down-regulation of DNA repair signature in VLS was functionally validated by a lower % of RAD51 and BRCA1-positive tumor cells. If these data can be corroborated in a prospective trial, an easy, cost-effective test could be routinely used to better manage treatment in MPM patients.
DNA修复在恶性胸膜间皮瘤(MPM)的肿瘤发生和进展中起重要作用。需要用于更好管理MPM患者的预后/预测生物标志物。在本手稿中,我们分析了一组MPM患者中700多个基因的表达,以寻找可能与生存相关的生物标志物。
本研究纳入了54例均为上皮样组织学的MPM患者,这些患者有生存随访数据且有福尔马林固定石蜡包埋的肿瘤标本。使用Nanostring平台评估基因表达谱,该平台分析了760个参与不同细胞途径的基因。使用免疫荧光测定法评估RAD51和BRCA1灶阳性的增殖肿瘤细胞百分比,作为同源重组修复状态的读数。
患者的中位生存时间为16.9个月,基于此值,他们被分为长生存期和短生存期患者(LS/SS),总生存期分别≥和<16.9个月,以及非常长生存期和非常短生存期患者(VLS/VSS),总生存期分别≥33.8个月和<8.45个月。与SS和VSS相比,在LS和VLS中观察到DNA损伤/修复表达评分下调。与VSS相比,VLS中RAD51和BRCA1阳性肿瘤细胞数量减少,验证了这些发现。
VLS中DNA修复特征的下调通过RAD51和BRCA1阳性肿瘤细胞百分比降低得到功能验证。如果这些数据能在前瞻性试验中得到证实,一种简单、经济有效的检测方法可常规用于更好地管理MPM患者的治疗。