Aman Aamir, Ali Saba, Mahalapbutr Panupong, Krusong Kuakarun, Wolschann Peter, Rungrotmongkol Thanyada
Program in Bioinformatics and Computational Biology, Graduate School, Chulalongkorn University Bangkok 10330 Thailand
Center of Excellence in Structural and Computational Biology, Department of Biochemistry, Faculty of Science, Chulalongkorn University Bangkok 10330 Thailand.
RSC Adv. 2023 Sep 11;13(39):27244-27254. doi: 10.1039/d3ra03867j. eCollection 2023 Sep 8.
Sorafenib (SOR) is an oral multikinase inhibitor that effectively hampers the growth and spread of cancer cells by targeting angiogenesis and proliferation. However, SOR tablets (Nexavar) have limited oral bioavailability, ranging from 38% to 49%, due to their low water solubility. To address this issue, cyclodextrins (CDs), widely used to enhance the solubility and stability of lipophilic drugs by encapsulating them within their molecular structure, were considered in this study. We focused on β-cyclodextrin (βCD) and its derivatives, including hydroxypropyl-β-cyclodextrin (HPβCD), dimethyl-β-cyclodextrin (DMβCD), sulfobutylether-β-cyclodextrin (SBEβCD), and compared them with γ-cyclodextrin (γCD) for generating inclusion complexes with SOR. The 200 ns molecular dynamics simulations revealed that SOR could form inclusion complexes with all CDs in two possible orientations: pyridine group insertion (P-form) and chlorobenzotrifluoride group insertion (C-form), primarily driven by van der Waals interactions. Among the four βCD derivatives studied, SOR exhibited the highest number of atom contacts with SBEβCD and demonstrated the lowest solvent accessibility within the hydrophobic cavity of SBEβCD. These findings correlated with the highest binding affinity of SOR/SBEβCD complex determined by SIE, MM/GBSA, and MM/PBSA methods. Experimental results further supported our computational predictions, in which SBEβCD exhibited a stability constant of 940 M at 25 °C, surpassing βCD's stability constant of 210 M. Taken together, our results suggest that the modified CDs, particularly SBEβCD, hold promising potential as an efficient molecular encapsulating agent for SOR, offering improved solubility and stability for this lipophilic drug.
索拉非尼(SOR)是一种口服多激酶抑制剂,通过靶向血管生成和增殖有效地抑制癌细胞的生长和扩散。然而,由于索拉非尼片剂(多吉美)的水溶性低,其口服生物利用度有限,在38%至49%之间。为了解决这个问题,本研究考虑了环糊精(CDs),它们通过将亲脂性药物包封在其分子结构中来广泛用于提高其溶解度和稳定性。我们重点研究了β-环糊精(βCD)及其衍生物,包括羟丙基-β-环糊精(HPβCD)、二甲基-β-环糊精(DMβCD)、磺丁基醚-β-环糊精(SBEβCD),并将它们与γ-环糊精(γCD)进行比较,以生成与索拉非尼的包合物。200纳秒的分子动力学模拟表明,索拉非尼可以与所有环糊精以两种可能的取向形成包合物:吡啶基团插入(P型)和三氟氯苯基团插入(C型),主要由范德华相互作用驱动。在所研究的四种βCD衍生物中,索拉非尼与SBEβCD的原子接触数最多,并且在SBEβCD的疏水腔内表现出最低的溶剂可及性。这些发现与通过SIE、MM/GBSA和MM/PBSA方法测定的索拉非尼/SBEβCD复合物的最高结合亲和力相关。实验结果进一步支持了我们的计算预测,其中SBEβCD在25℃时的稳定常数为940 M,超过了βCD的210 M的稳定常数。综上所述,我们的结果表明,改性环糊精,特别是SBEβCD,作为索拉非尼的一种有效的分子包封剂具有广阔的潜力,为这种亲脂性药物提供了改善的溶解度和稳定性。