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脊髓损伤后大鼠神经性膀胱中环状 RNA 的表达谱和竞争内源性 RNA 的相互作用网络。

Expression profiles of circular RNAs and interaction networks of competing endogenous RNAs in neurogenic bladder of rats following suprasacral spinal cord injury.

机构信息

Department of Urology, Xuanwu Hospital Capital Medical University, Beijing, China.

出版信息

PeerJ. 2023 Sep 18;11:e16042. doi: 10.7717/peerj.16042. eCollection 2023.

Abstract

BACKGROUND

Neurogenic bladder (NB) following suprasacral spinal cord injury (SSCI) is an interstitial disease with the structural remodeling of bladder tissue and matrix over-deposition. Circular RNAs (circRNAs) are involved in fibrotic disease development through their post-transcriptional regulatory functions. This study aimed to use transcriptome high-throughput sequencing to investigate the process of NB and bladder fibrosis after SSCI.

METHODS

Spinal cord transection at the T10-T11 level was used to construct the SSCI model in rats (10-week-old female Wistar rats, weighing 200 ± 20 g). The bladders were collected without (sham group) and with (SSCI 1-3 groups) NB status. Morphological examination was conducted to assess the extent of bladder fibrosis. Additionally, RNA sequencing was utilized to determine mRNAs and circRNAs expression patterns. The dynamic changes of differentially expressed mRNAs (DEMs) and circRNAs (DECs) in different periods of SSCI were further analyzed.

RESULTS

Bladder weight, smooth muscle cell hypertrophy, and extracellular matrix gradually increased after SSCI. Compared with the sham group, 3,255 DEMs and 1,339 DECs, 3,449 DEMs and 1,324 DECs, 884 DEMs, and 1,151 DECs were detected in the SSCI 1-3 groups, respectively. Specifically, circRNA3621, circRNA0617, circRNA0586, and circRNA4426 were significant DECs common to SSCI 1-3 groups compared with the sham group. Moreover, Gene Ontology (GO) enrichment suggested that inflammatory and chronic inflammatory responses were the key events in NB progression following SSCI. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways enrichment associated with the "Chemokine signaling pathway", the "IL-17 signaling pathway", and the "TGF-beta signaling pathway" suggests their potential involvement in regulating biological processes. The circRNA-miRNA-mRNA interaction networks of DECs revealed rno-circ-2239 (micu2) as the largest node, indicating that the rno-circ-2239-miRNA-mRNA-mediated network may play a critical role in the pathogenesis of SSCI-induced NB.

CONCLUSIONS

This study offers a comprehensive outlook on the possible roles of DEMs and DECs in bladder fibrosis and NB progression following SSCI. These findings have the potential to serve as novel biomarkers and therapeutic targets.

摘要

背景

脊髓损伤(SCI)后神经源性膀胱(NB)是一种间质疾病,存在膀胱组织和基质的结构重塑和过度沉积。环状 RNA(circRNA)通过其转录后调控功能参与纤维化疾病的发展。本研究旨在使用转录组高通量测序来研究 SCI 后 NB 和膀胱纤维化的发生过程。

方法

在 T10-T11 水平切断脊髓,构建大鼠 SCI 模型(10 周龄雌性 Wistar 大鼠,体重 200±20 g)。收集无 NB 状态(假手术组)和有 NB 状态(SCI 1-3 组)的膀胱。形态学检查评估膀胱纤维化程度。此外,还进行了 RNA 测序,以确定 mRNAs 和 circRNAs 的表达模式。进一步分析不同 SCI 时期差异表达的 mRNAs(DEMs)和 circRNAs(DECs)的动态变化。

结果

SCI 后膀胱重量、平滑肌细胞肥大和细胞外基质逐渐增加。与假手术组相比,在 SCI 1-3 组中分别检测到 3255 个 DEMs 和 1339 个 DECs、3449 个 DEMs 和 1324 个 DECs、884 个 DEMs 和 1151 个 DECs。具体而言,与假手术组相比,circRNA3621、circRNA0617、circRNA0586 和 circRNA4426 是 SCI 1-3 组共有的显著 DECs。此外,GO 富集表明,炎症和慢性炎症反应是 SCI 后 NB 进展的关键事件。KEGG 通路富集与“趋化因子信号通路”、“IL-17 信号通路”和“TGF-β 信号通路”相关,表明它们可能参与调节生物学过程。DEC 的 circRNA-miRNA-mRNA 相互作用网络显示 rno-circ-2239(micu2)为最大节点,表明 rno-circ-2239-miRNA-mRNA 介导的网络可能在 SCI 诱导的 NB 发病机制中发挥关键作用。

结论

本研究全面探讨了 DEMs 和 DECs 在 SCI 后膀胱纤维化和 NB 进展中的可能作用。这些发现有可能成为新的生物标志物和治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5516/10512963/c6aa3d72dace/peerj-11-16042-g001.jpg

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