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用于在感染期间探究宿主生物学的基于活性的工具。

Activity-based Tools for Interrogating Host Biology During Infection.

作者信息

Ramanathan Renuka, Hatzios Stavroula K

机构信息

Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06520 USA.

Microbial Sciences Institute, Yale University, West Haven, CT 06516 USA.

出版信息

Isr J Chem. 2023 Mar;63(3-4). doi: 10.1002/ijch.202200095. Epub 2023 Feb 16.

Abstract

Host cells sense and respond to pathogens by dynamically regulating cell signaling. The rapid modulation of signaling pathways is achieved by post-translational modifications (PTMs) that can alter protein structure, function, and/or binding interactions. By using chemical probes to broadly profile changes in enzyme function or side-chain reactivity, activity-based protein profiling (ABPP) can reveal PTMs that regulate host-microbe interactions. While ABPP has been widely utilized to uncover microbial mechanisms of pathogenesis, in this review, we focus on more recent applications of this technique to the discovery of host PTMs and enzymes that modulate signaling within infected cells. Collectively, these advances underscore the importance of ABPP as a tool for interrogating the host response to infection and identifying potential targets for host-directed therapies.

摘要

宿主细胞通过动态调节细胞信号传导来感知病原体并做出反应。信号通路的快速调节是通过翻译后修饰(PTM)实现的,这些修饰可以改变蛋白质的结构、功能和/或结合相互作用。通过使用化学探针广泛分析酶功能或侧链反应性的变化,基于活性的蛋白质谱分析(ABPP)可以揭示调节宿主-微生物相互作用的PTM。虽然ABPP已被广泛用于揭示微生物致病机制,但在本综述中,我们重点关注该技术在发现宿主PTM和调节受感染细胞内信号传导的酶方面的最新应用。总的来说,这些进展强调了ABPP作为一种工具在研究宿主对感染的反应以及确定宿主导向疗法潜在靶点方面的重要性。

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2
Activity-based protein profiling of human and serine hydrolases and interrogation of potential antimalarial targets.
iScience. 2022 Aug 24;25(9):104996. doi: 10.1016/j.isci.2022.104996. eCollection 2022 Sep 16.
3
An infection-induced oxidation site regulates legumain processing and tumor growth.
Nat Chem Biol. 2022 Jul;18(7):698-705. doi: 10.1038/s41589-022-00992-x. Epub 2022 Mar 24.
6
Altered ISGylation drives aberrant macrophage-dependent immune responses during SARS-CoV-2 infection.
Nat Immunol. 2021 Nov;22(11):1416-1427. doi: 10.1038/s41590-021-01035-8. Epub 2021 Oct 18.
7
Identification of cell wall synthesis inhibitors active against Mycobacterium tuberculosis by competitive activity-based protein profiling.
Cell Chem Biol. 2022 May 19;29(5):883-896.e5. doi: 10.1016/j.chembiol.2021.09.002. Epub 2021 Oct 1.
8
Plastin 3 in health and disease: a matter of balance.
Cell Mol Life Sci. 2021 Jul;78(13):5275-5301. doi: 10.1007/s00018-021-03843-5. Epub 2021 May 23.
9
MicroRNA Interference in Hepatic Host-Pathogen Interactions.
Int J Mol Sci. 2021 Mar 30;22(7):3554. doi: 10.3390/ijms22073554.

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