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PDGFRA 多态性与日本人群角膜散光风险的关联。

Association of PDGFRA polymorphisms with the risk of corneal astigmatism in a Japanese population.

机构信息

Department of Neuroanatomy, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, 236-0004, Japan.

Fukasaku Eye Institute, Yokohama, Kanagawa, 220-0003, Japan.

出版信息

Sci Rep. 2023 Sep 26;13(1):16075. doi: 10.1038/s41598-023-43333-1.

Abstract

Corneal astigmatism is reportedly associated with polymorphisms of the platelet-derived growth factor receptor alpha (PDGFRA) gene region in Asian populations of Chinese, Malay, and Indian ancestry and populations of European ancestry. In this study, we investigated whether these PDGFRA polymorphisms are associated with corneal astigmatism in a Japanese population. We recruited 1,535 cases with corneal astigmatism (mean corneal cylinder power across both eyes: ≤  - 0.75 diopters [D]) and 842 controls (> - 0.75 D) to genotype 13 single-nucleotide polymorphisms (SNPs) in the PDGFRA gene region. We also performed imputation analysis in the region, with 179 imputed SNPs included in the statistical analyses. The PDGFRA SNPs were not significantly associated with the cases with corneal astigmatism ≤  - 0.75 D. However, the odds ratios (ORs) of the minor alleles of SNPs in the upstream region of PDGFRA, including rs7673984, rs4864857, and rs11133315, tended to increase according to the degree of corneal astigmatism, and these SNPs were significantly associated with the cases with corneal astigmatism ≤  - 1.25 D or ≤  - 1.50 D (Pc < 0.05, OR = 1.34-1.39). These results suggest that PDGFRA SNPs play a potential role in the development of greater corneal astigmatism.

摘要

据报道,血小板衍生生长因子受体α(PDGFRA)基因区域的多态性与亚洲人群(包括中国、马来和印度裔)以及欧洲人群的角膜散光有关。在这项研究中,我们调查了这些 PDGFRA 多态性是否与日本人群的角膜散光有关。我们招募了 1535 例角膜散光患者(双眼平均角膜散光值:≤-0.75 屈光度 [D])和 842 例对照者(>-0.75 D),对 PDGFRA 基因区域的 13 个单核苷酸多态性(SNPs)进行基因分型。我们还对该区域进行了单倍型推断分析,其中包括 179 个推断的 SNPs 进行了统计分析。PDGFRA SNPs 与角膜散光值≤-0.75 D 的病例无显著相关性。然而,PDGFRA 上游区域 SNPs(包括 rs7673984、rs4864857 和 rs11133315)的次要等位基因的比值比(ORs)随着角膜散光程度的增加而增加,这些 SNPs 与角膜散光值≤-1.25 D 或≤-1.50 D 的病例显著相关(Pc<0.05,OR=1.34-1.39)。这些结果表明,PDGFRA SNPs 在发展更大程度的角膜散光度中可能发挥作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd90/10522672/66534af984b7/41598_2023_43333_Fig1_HTML.jpg

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