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从虚拟筛选和合理的结构优化中鉴定出一种新型、有效、口服生物利用的胍基 SHP2 别构抑制剂,用于治疗 KRAS 突变型癌症。

Identification of a Novel, Potent, and Orally Bioavailable Guanidine-Based SHP2 Allosteric Inhibitor from Virtual Screening and Rational Structural Optimization for the Treatment of KRAS Mutant Cancers.

机构信息

Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, Nanjing 211198, China.

Institute of Innovative Drug Discovery and Development, China Pharmaceutical University, Nanjing 211198, China.

出版信息

J Med Chem. 2023 Oct 12;66(19):13646-13664. doi: 10.1021/acs.jmedchem.3c00992. Epub 2023 Sep 27.

DOI:10.1021/acs.jmedchem.3c00992
PMID:37754066
Abstract

Src homology-2 domain containing protein tyrosine phosphatase-2 (SHP2) is a highly attractive therapeutic target for treating Kirsten rat sarcoma viral oncogene (KRAS) mutant cancers. In this work, a series of guanidine-based SHP2 allosteric inhibitors were discovered via virtual screening and rational structural optimization. Notably, lead compound with potent SHP2 inhibitory activity (IC = 17.7 nM) effectively inhibited the proliferation, migration, and invasion of MIA PaCa-2 pancreatic cancer cells. Furthermore, compound featured great in vivo pharmacokinetic properties (AUC = 4320 nM·h; = 66.3%) and exhibited significant antitumor efficacy in the MIA PaCa-2 xenograft mouse model. This demonstrates that compound is a potential lead compound for the development of SHP2 allosteric inhibitors to treat KRAS mutant cancers. Moreover, these guanidine-based scaffolds may provide an opportunity to mitigate the potential safety risks of the alkyl amine motif predominately incorporated in current SHP2 allosteric inhibitors.

摘要

Src 同源物-2 结构域包含蛋白酪氨酸磷酸酶-2(SHP2)是治疗 Kirsten 大鼠肉瘤病毒癌基因(KRAS)突变型癌症的极具吸引力的治疗靶点。在这项工作中,通过虚拟筛选和合理的结构优化,发现了一系列胍基 SHP2 别构抑制剂。值得注意的是,先导化合物 具有很强的 SHP2 抑制活性(IC = 17.7 nM),可有效抑制 MIA PaCa-2 胰腺癌细胞的增殖、迁移和侵袭。此外,化合物 在体内具有良好的药代动力学特性(AUC = 4320 nM·h; = 66.3%),并在 MIA PaCa-2 异种移植小鼠模型中表现出显著的抗肿瘤疗效。这表明化合物 是开发 SHP2 别构抑制剂治疗 KRAS 突变型癌症的潜在先导化合物。此外,这些胍基骨架可能为减轻当前 SHP2 别构抑制剂中主要包含的烷基胺基序的潜在安全风险提供机会。

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