Suppr超能文献

家族性自发性冠状动脉夹层中罕见基因变异的鉴定及共享生物学途径的证据

Identification of Rare Genetic Variants in Familial Spontaneous Coronary Artery Dissection and Evidence for Shared Biological Pathways.

作者信息

Turley Tamiel N, Theis Jeanne L, Evans Jared M, Fogarty Zachary C, Gulati Rajiv, Hayes Sharonne N, Tweet Marysia S, Olson Timothy M

机构信息

Molecular Pharmacology and Experimental Therapeutics Track, Mayo Clinic Graduate School of Biomedical Sciences, Mayo Clinic, Rochester, MN 55905, USA.

Cardiovascular Genetics Research Laboratory, Mayo Clinic, Rochester, MN 55905, USA.

出版信息

J Cardiovasc Dev Dis. 2023 Sep 12;10(9):393. doi: 10.3390/jcdd10090393.

Abstract

Rare familial spontaneous coronary artery dissection (SCAD) kindreds implicate genetic disease predisposition and provide a unique opportunity for candidate gene discovery. Whole-genome sequencing was performed in fifteen probands with non-syndromic SCAD who had a relative with SCAD, eight of whom had a second relative with extra-coronary arteriopathy. Co-segregating variants and associated genes were prioritized by quantitative variant, gene, and disease-level metrics. Curated public databases were queried for functional relationships among encoded proteins. Fifty-four heterozygous coding variants in thirteen families co-segregated with disease and fulfilled primary filters of rarity, gene variation constraint, and predicted-deleterious protein effect. Secondary filters yielded 11 prioritized candidate genes in 12 families, with high arterial tissue expression ( = 7), high-confidence protein-level interactions with genes associated with SCAD previously ( = 10), and/or previous associations with connective tissue disorders and aortopathies ( = 3) or other vascular phenotypes in mice or humans ( = 11). High-confidence associations were identified among 10 familial SCAD candidate-gene-encoded proteins. A collagen-encoding gene was identified in five families, two with distinct variants in COL4A2. Familial SCAD is genetically heterogeneous, yet perturbations of extracellular matrix, cytoskeletal, and cell-cell adhesion proteins implicate common disease-susceptibility pathways. Incomplete penetrance and variable expression suggest genetic or environmental modifiers.

摘要

罕见的家族性自发性冠状动脉夹层(SCAD)家系提示存在遗传疾病易感性,并为候选基因的发现提供了独特的机会。对15名非综合征性SCAD先证者进行了全基因组测序,这些先证者有一名亲属患有SCAD,其中8人有第二名患有冠状动脉外动脉病变的亲属。通过定量变异、基因和疾病水平指标对共分离变异和相关基因进行优先级排序。查询经过整理的公共数据库以了解编码蛋白之间的功能关系。13个家族中的54个杂合编码变异与疾病共分离,并满足罕见性、基因变异限制和预测有害蛋白效应的主要筛选标准。二级筛选在12个家族中产生了11个优先候选基因,这些基因在动脉组织中高表达(=7),与先前与SCAD相关的基因有高可信度的蛋白水平相互作用(=10),和/或先前与结缔组织疾病和主动脉病变(=3)或小鼠或人类的其他血管表型(=11)有关联。在10个家族性SCAD候选基因编码蛋白之间鉴定出高可信度的关联。在5个家族中鉴定出一个胶原蛋白编码基因,其中2个家族在COL4A2中有不同的变异。家族性SCAD在遗传上是异质性的,但细胞外基质、细胞骨架和细胞间粘附蛋白的扰动暗示了常见的疾病易感性途径。不完全外显率和可变表达提示存在遗传或环境修饰因子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/006c/10532385/fe32661e808a/jcdd-10-00393-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验