School of Marine Science and Engineering, Qingdao Agricultural University, Qingdao 266109, China.
CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China.
Int J Mol Sci. 2023 Sep 14;24(18):14062. doi: 10.3390/ijms241814062.
represents a type of single-transmembrane adaptor protein containing an N-terminal cysteine-rich domain and a proline-rich C-terminal region. Nine subfamily genes have been proposed in most vertebrates; however, some might be species-specific. The number of genes present in zebrafish remains unclear. This study aimed to investigate the evolutionary relationships among family genes in zebrafish (TU strain) using phylogenetic and syntenic analyses. The function of was preliminarily examined via CRISPR/Cas13d-mediated knockdown. Following identification in zebrafish, 10 family genes, namely , , , , , , , , , and , were classified into three main clades and six subclades. Their encoding proteins contained a cysteine-rich N-terminal domain and a proline-rich C-terminal region containing different motifs. A specific syntenic block containing and was observed to be conserved across all species. Furthermore, all these genes were expressed during embryogenesis. was expressed in the presomitic mesoderm, somites, and so on. was identified as a regulator of the expression of the somite formation marker . Overall, our study provides new insights into the evolution of family genes and the control of over the convergent extension cells of somitic precursors in zebrafish.
代表一类含有 N 端富含半胱氨酸域和富含脯氨酸 C 端区域的单跨膜衔接蛋白。大多数脊椎动物中提出了九个 亚家族基因;然而,有些可能是物种特异性的。斑马鱼中存在的 基因数量尚不清楚。本研究旨在使用系统发育和共线性分析来研究斑马鱼(TU 品系)中 家族基因的进化关系。通过 CRISPR/Cas13d 介导的敲低初步检查了 的功能。在鉴定出斑马鱼中的 后,将 10 个 家族基因,即 、 、 、 、 、 、 、 和 ,分为三个主要分支和六个亚分支。它们编码的蛋白质含有一个富含半胱氨酸的 N 端结构域和一个富含脯氨酸的 C 端区域,其中包含不同的基序。观察到含有 和 的特定共线性块在所有物种中都保守。此外,所有这些基因在胚胎发生过程中均有表达。 在体节形成前中胚层、体节等中表达。被鉴定为体节形成标记 的表达调节剂 。总的来说,我们的研究为 家族基因的进化和 对斑马鱼体节前体细胞的趋同延伸细胞的控制提供了新的见解。