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异质性耐药的药物动力学和群体动力学的理论考量与实证预测

Theoretical Considerations and Empirical Predictions of the Pharmaco- and Population Dynamics of Heteroresistance.

作者信息

Levin Bruce R, Berryhill Brandon A, Gil-Gil Teresa, Manuel Joshua A, Smith Andrew P, Choby Jacob E, Andersson Dan I, Weiss David S, Baquero Fernando

机构信息

Department of Biology, Emory University; Atlanta, Georgia, 30322, USA.

Emory Antibiotic Resistance Center; Atlanta, Georgia, 30322, USA.

出版信息

bioRxiv. 2023 Oct 24:2023.09.21.558832. doi: 10.1101/2023.09.21.558832.

Abstract

Antibiotics are considered one of the most important contributions to clinical medicine in the last 100 years. Due to the use and overuse of these drugs, there have been increasing frequencies of infections with resistant pathogens. One form of resistance, heteroresistance, is particularly problematic; pathogens appear sensitive to a drug by common susceptibility tests. However, upon exposure to the antibiotic, resistance rapidly ascends, and treatment fails. To quantitatively explore the processes contributing to the emergence and ascent of resistance during treatment and the waning of resistance following cessation of treatment, we develop two distinct mathematical and computer-simulations models of heteroresistance. In our analysis of the properties of these models, we consider the factors that determine the response to antibiotic-mediated selection. In one model, heteroresistance is progressive, with each resistant state sequentially generating a higher resistance level. In the other model, heteroresistance is non-progressive, with a susceptible population directly generating populations with different resistance levels. The conditions where resistance will ascend in the progressive model are narrower than those of the non-progressive model. The rates of reversion from the resistant to the sensitive states are critically dependent on the transition rates and the fitness cost of resistance. Our results demonstrate that the standard test used to identify heteroresistance is insufficient. The predictions of our models are consistent with empirical results. Our results demand a reevaluation of the definition and criteria employed to identify heteroresistance. We recommend the definition of heteroresistance should include a consideration of the rate of return to susceptibility.

摘要

抗生素被认为是过去100年里临床医学最重要的贡献之一。由于这些药物的使用和过度使用,耐药病原体感染的频率不断增加。一种耐药形式,即异质性耐药,尤其成问题;病原体通过常规药敏试验对药物表现出敏感。然而,在接触抗生素后,耐药性迅速上升,治疗失败。为了定量探究治疗期间导致耐药性出现和上升以及治疗停止后耐药性减弱的过程,我们开发了两个不同的异质性耐药数学模型和计算机模拟模型。在分析这些模型的特性时,我们考虑了决定对抗生素介导选择反应的因素。在一个模型中,异质性耐药是渐进性的,每个耐药状态依次产生更高的耐药水平。在另一个模型中(此处原文缺失部分内容描述,推测为异质性耐药是非渐进性的),异质性耐药是非渐进性的,敏感群体直接产生具有不同耐药水平的群体。渐进性模型中耐药性上升的条件比非渐进性模型的更狭窄。从耐药状态恢复到敏感状态的速率严重依赖于转变速率和耐药的适合度代价。我们的结果表明,用于识别异质性耐药的标准测试是不充分的。我们模型的预测与实证结果一致。我们的结果要求重新评估用于识别异质性耐药的定义和标准。我们建议异质性耐药的定义应包括对恢复敏感性速率的考量。

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