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单细胞多组学分析 COVID-19 合并自身免疫性疾病患者,显示感染后异常的免疫反应。

Single-cell multi-omics analysis of COVID-19 patients with pre-existing autoimmune diseases shows aberrant immune responses to infection.

机构信息

Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.

Department of Medical Genetics, University of Cambridge, Cambridge, United Kingdom.

出版信息

Eur J Immunol. 2024 Jan;54(1):e2350633. doi: 10.1002/eji.202350633. Epub 2023 Oct 20.

DOI:10.1002/eji.202350633
PMID:37799110
Abstract

In COVID-19, hyperinflammatory and dysregulated immune responses contribute to severity. Patients with pre-existing autoimmune conditions can therefore be at increased risk of severe COVID-19 and/or associated sequelae, yet SARS-CoV-2 infection in this group has been little studied. Here, we performed single-cell analysis of peripheral blood mononuclear cells from patients with three major autoimmune diseases (rheumatoid arthritis, psoriasis, or multiple sclerosis) during SARS-CoV-2 infection. We observed compositional differences between the autoimmune disease groups coupled with altered patterns of gene expression, transcription factor activity, and cell-cell communication that substantially shape the immune response under SARS-CoV-2 infection. While enrichment of HLA-DRlow CD14+ monocytes was observed in all three autoimmune disease groups, type-I interferon signaling as well as inflammatory T cell and monocyte responses varied widely between the three groups of patients. Our results reveal disturbed immune responses to SARS-CoV-2 in patients with pre-existing autoimmunity, highlighting important considerations for disease treatment and follow-up.

摘要

在 COVID-19 中,过度活跃和失调的免疫反应导致病情加重。因此,患有自身免疫性疾病的患者可能面临更严重的 COVID-19 和/或相关后遗症的风险,然而,针对这一群体的 SARS-CoV-2 感染研究甚少。在这里,我们对三种主要自身免疫性疾病(类风湿关节炎、银屑病或多发性硬化症)患者在 SARS-CoV-2 感染期间的外周血单核细胞进行了单细胞分析。我们观察到自身免疫性疾病组之间存在组成差异,以及基因表达、转录因子活性和细胞间通讯模式的改变,这些改变在 SARS-CoV-2 感染下极大地塑造了免疫反应。尽管在所有三种自身免疫性疾病组中均观察到 HLA-DRlow CD14+单核细胞的富集,但 I 型干扰素信号以及炎症性 T 细胞和单核细胞反应在三组患者之间差异很大。我们的结果揭示了患有自身免疫性疾病的患者对 SARS-CoV-2 的免疫反应失调,强调了疾病治疗和随访的重要考虑因素。

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