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利用 RNA 测序分析 1 型肌强直性营养不良大脑白质中的剪接异常。

Analysis of splicing abnormalities in the white matter of myotonic dystrophy type 1 brain using RNA sequencing.

机构信息

Department of Neurology, Hyogo Medical University, Nishinomiya, 663-8501 Hyogo, Japan.

Department of Biostatistics, Hyogo Medical University, Nishinomiya, 663-8501 Hyogo, Japan.

出版信息

Neurosci Res. 2024 Mar;200:48-56. doi: 10.1016/j.neures.2023.10.002. Epub 2023 Oct 6.

Abstract

Myotonic dystrophy type 1 (DM1) is a neuromuscular disorder caused by the genomic expansion of CTG repeats, in which RNA-binding proteins, such as muscleblind-like protein, are sequestered in the nucleus, and abnormal splicing is observed in various genes. Although abnormal splicing occurs in the brains of patients with DM1, its relation to central nervous system symptoms is unknown. Several imaging studies have indicated substantial white matter defects in patients with DM1. Here, we performed RNA sequencing and analysis of CTG repeat lengths in the frontal lobe of patients with DM1, separating the gray matter and white matter, to investigate splicing abnormalities in the DM1 brain, especially in the white matter. Several genes showed similar levels of splicing abnormalities in both gray and white matter, with an observable trend toward an increased number of repeats in the gray matter. These findings suggest that white matter defects in DM1 stem from aberrant RNA splicing in both gray and white matter. Notably, several of the genes displaying abnormal splicing are recognized as being dominantly expressed in astrocytes and oligodendrocytes, leading us to hypothesize that splicing defects in the white matter may be attributed to abnormal RNA splicing in glial cells.

摘要

肌强直性营养不良 1 型(DM1)是一种由 CTG 重复序列扩增引起的神经肌肉疾病,其中 RNA 结合蛋白,如肌肉萎缩蛋白,被隔离在核内,并且在各种基因中观察到异常剪接。尽管 DM1 患者的大脑中存在异常剪接,但它与中枢神经系统症状的关系尚不清楚。几项影像学研究表明 DM1 患者存在大量的白质缺陷。在这里,我们对 DM1 患者额叶的 CTG 重复长度进行了 RNA 测序和分析,将灰质和白质分开,以研究 DM1 大脑,特别是白质中的剪接异常。一些基因在灰质和白质中都表现出相似水平的剪接异常,并且在灰质中可以观察到重复次数增加的趋势。这些发现表明 DM1 中的白质缺陷源于灰质和白质中异常的 RNA 剪接。值得注意的是,一些显示异常剪接的基因被认为在星形胶质细胞和少突胶质细胞中呈显性表达,这使我们假设白质中的剪接缺陷可能归因于神经胶质细胞中异常的 RNA 剪接。

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