Department of Periodontology, Oral Medicine and Oral Surgery, Institute for Dental and Craniofacial Sciences, Charité-University Medicine Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Berlin, Germany.
Core Unit Bioinformatics, Berlin Institute of Health, Berlin, Germany.
J Dent Res. 2023 Dec;102(13):1488-1497. doi: 10.1177/00220345231197984. Epub 2023 Oct 11.
Several array-based microRNA (miRNA) expression studies independently showed increased expression of miRNAs hsa-miR-130a-3p, -142-3p, -144-3p, -144-5p, -223-3p, -17-5p, and -30e-5p in gingiva affected by periodontal inflammation. We aimed to determine direct target genes and signaling pathways regulated by these miRNAs to identify processes relevant to gingival inflammatory responses and tissue homeostasis. We transfected miRNA mimics (mirVana) for each of the 7 miRNAs separately into human primary gingival fibroblasts cultured from 3 different donors. Following RNA sequencing, differential gene expression and second-generation gene set enrichment analyses were performed. miRNA inhibition and upregulation was validated at the transcript and protein levels using quantitative reverse transcriptase polymerase chain reaction, Western blotting, and reporter gene assays. All 7 miRNAs significantly increased expression of the gene proto-oncogene, receptor tyrosine kinase (). Expression of known periodontitis risk genes , , and was significantly repressed by hsa-miR-130a-3p, -144-3p, and -144-5p, respectively. The genes , , , and showed the most significant and strongest downregulation after hsa-miR-142-3p, -17-5p, -223-3p, and -30e-5p transfection, respectively. The most significantly regulated gene set of each miRNA related to cell cycle (hsa-miRNA-144-3p and -5p [ = 4 × 10 and = 4 × 10], -miR-17-5p [ = 9.5 × 10], -miR-30e-5p [ = 8.2 × 10], -miR-130a-3p [ = 5 × 10]), integrin cell surface interaction (-miR-223-3p [ = 2.4 × 10]), and interferon signaling (-miR-142-3p [ = 5 × 10]). At the end of acute inflammation, gingival miRNAs bring together complex regulatory networks that lead to increased expression of the gene . This underscores the importance of mesenchymal cell migration and invasion during gingival tissue remodeling and proliferation in restoring periodontal tissue homeostasis after active inflammation. , a receptor of the mitogenic hepatocyte growth factor fibroblast secreted, is a core gene of this process.
几项基于阵列的 microRNA (miRNA) 表达研究独立表明,牙周炎症影响的牙龈中 miRNA hsa-miR-130a-3p、-142-3p、-144-3p、-144-5p、-223-3p、-17-5p 和 -30e-5p 的表达增加。我们旨在确定这些 miRNA 调控的直接靶基因和信号通路,以鉴定与牙龈炎症反应和组织稳态相关的过程。我们分别用 miRNA 模拟物(mirVana)转染来自 3 个不同供体培养的人原代牙龈成纤维细胞中的 7 个 miRNA。在 RNA 测序后,进行差异基因表达和第二代基因集富集分析。使用定量逆转录聚合酶链反应、Western 印迹和报告基因测定在转录和蛋白质水平上验证 miRNA 的抑制和上调。所有 7 种 miRNA 均显著增加了原癌基因、受体酪氨酸激酶 () 的表达。hsa-miR-130a-3p、-144-3p 和 -144-5p 分别显著抑制了已知的牙周炎风险基因 、 和 的表达。基因 、 、 和 在 hsa-miR-142-3p、-17-5p、-223-3p 和 -30e-5p 转染后表现出最显著和最强的下调。每种 miRNA 最显著调控的基因集与细胞周期有关(hsa-miRNA-144-3p 和 -5p [=4×10 和 =4×10]、-miR-17-5p [=9.5×10]、-miR-30e-5p [=8.2×10]、-miR-130a-3p [=5×10]),整合素细胞表面相互作用(-miR-223-3p [=2.4×10])和干扰素信号(-miR-142-3p [=5×10])。在急性炎症末期,牙龈 miRNA 汇聚了复杂的调控网络,导致基因 的表达增加。这突显了在积极炎症后恢复牙周组织稳态期间,间充质细胞迁移和侵袭在牙龈组织重塑和增殖中的重要性。成纤维细胞分泌的有丝分裂原肝细胞生长因子受体 是该过程的核心基因。