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FertilityOnline: A Straightforward Pipeline for Functional Gene Annotation and Disease Mutation Discovery.育在线:功能基因注释和疾病突变发现的直截了当的途径。
Genomics Proteomics Bioinformatics. 2022 Jun;20(3):455-465. doi: 10.1016/j.gpb.2021.08.010. Epub 2021 Dec 24.
2
Novel frameshift mutation in STK33 is associated with asthenozoospermia and multiple morphological abnormalities of the flagella.STK33基因中的新型移码突变与弱精子症及鞭毛多形态异常相关。
Hum Mol Genet. 2021 Oct 13;30(21):1977-1984. doi: 10.1093/hmg/ddab165.
3
A novel splicing variant in DNAH8 causes asthenozoospermia.一种新的 DNAH8 剪接变异导致弱精症。
J Assist Reprod Genet. 2021 Jun;38(6):1545-1550. doi: 10.1007/s10815-021-02116-1. Epub 2021 Feb 20.
4
Bi-allelic DNAH8 Variants Lead to Multiple Morphological Abnormalities of the Sperm Flagella and Primary Male Infertility.双等位 DNAH8 变异导致精子鞭毛多种形态异常和原发性男性不育。
Am J Hum Genet. 2020 Aug 6;107(2):330-341. doi: 10.1016/j.ajhg.2020.06.004. Epub 2020 Jul 2.
5
A DNAH17 missense variant causes flagella destabilization and asthenozoospermia.一种 DNAH17 错义变异导致鞭毛不稳定和弱精症。
J Exp Med. 2020 Feb 3;217(2). doi: 10.1084/jem.20182365.
6
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Am J Respir Cell Mol Biol. 2020 Mar;62(3):382-396. doi: 10.1165/rcmb.2019-0086OC.
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A new MEIOB mutation is a recurrent cause for azoospermia and testicular meiotic arrest.一个新的 MEIOB 突变是导致无精子症和睾丸减数分裂阻滞的一个常见原因。
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Bi-allelic Mutations in ARMC2 Lead to Severe Astheno-Teratozoospermia Due to Sperm Flagellum Malformations in Humans and Mice.ARMC2 的双等位基因突变导致人类和小鼠精子鞭毛畸形引起的严重少弱畸形精子症。
Am J Hum Genet. 2019 Feb 7;104(2):331-340. doi: 10.1016/j.ajhg.2018.12.013. Epub 2019 Jan 24.
9
Loss-of-function mutations in QRICH2 cause male infertility with multiple morphological abnormalities of the sperm flagella.QRICH2 基因功能丧失性突变导致精子鞭毛多形态异常的男性不育症。
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10
Somatic Tumor Variant Filtration Strategies to Optimize Tumor-Only Molecular Profiling Using Targeted Next-Generation Sequencing Panels.利用靶向新一代测序面板优化仅肿瘤分子谱分析的体细胞肿瘤变异过滤策略
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在患有精子鞭毛多种形态异常的不育兄弟中发现的新型 NPHP4 纯合错义变异。

A novel NPHP4 homozygous missense variant identified in infertile brothers with multiple morphological abnormalities of the sperm flagella.

机构信息

Division of Reproduction and Genetics, The First Affiliated Hospital of University of Science and Technology of China, School of Basic Medical Sciences, Division of Life Sciences and Medicine, Biomedical Sciences and Health Laboratory of Anhui Province, University of Science and Technology of China, Hefei, 230027, China.

Department of Biotechnology, COMSATS University Islamabad, Abbottabad Campus, Abbottabad, 22060, Pakistan.

出版信息

J Assist Reprod Genet. 2024 Jan;41(1):109-120. doi: 10.1007/s10815-023-02966-x. Epub 2023 Oct 13.

DOI:10.1007/s10815-023-02966-x
PMID:37831349
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10789708/
Abstract

PURPOSE

Asthenozoospermia is an important cause of male infertility, and the most serious type is characterized by multiple morphological abnormalities of the sperm flagella (MMAF). However, the precise etiology of MMAF remains unknown. In the current study, we recruited a consanguineous Pakistani family with two infertile brothers suffering from primary infertility due to MMAF without obvious signs of PCD.

METHODS

We performed whole-exome sequencing on DNAs of the patients, their parents, and a fertile brother and identified the homozygous missense variant (c.1490C > G (p.P497R) in NPHP4 as the candidate mutation for male infertility in this family.

RESULTS

Sanger sequencing confirmed that this mutation recessively co-segregated with the MMAF in this family. In silico analysis revealed that the mutation site is conserved across different species, and the identified mutation also causes abnormalities in the structure and hydrophobic interactions of the NPHP4 protein. Different bioinformatics tools predict that NPHP4 mutation is pathogenic. Furthermore, Papanicolaou staining and scanning electron microscopy of sperm revealed that affected individuals displayed typical MMAF phenotype with a high percentage of coiled, bent, short, absent, and/or irregular flagella. Transmission electron microscopy images of the patient's spermatozoa revealed significant anomalies in the sperm flagella with the absence of a central pair of microtubules (9 + 0) in every section scored.

CONCLUSIONS

Taken together, these results show that the homozygous missense mutation in NPHP4 is associated with MMAF.

摘要

目的

弱精症是男性不育的一个重要原因,其中最严重的类型表现为精子鞭毛多形态异常(MMAF)。然而,MMAF 的确切病因仍不清楚。在本研究中,我们招募了一个巴基斯坦的近亲家庭,其中两个不育的兄弟因 MMAF 而患有原发性不育,没有明显的 PCD 迹象。

方法

我们对患者、其父母和一个生育能力正常的兄弟的 DNA 进行了全外显子组测序,鉴定出 NPHP4 中的纯合错义突变(c.1490C>G(p.P497R)为该家系男性不育的候选突变。

结果

Sanger 测序证实该突变在这个家庭中与 MMAF 呈隐性共分离。序列比对分析表明突变位点在不同物种中保守,鉴定出的突变也导致了 NPHP4 蛋白结构和疏水性相互作用的异常。不同的生物信息学工具预测 NPHP4 突变是致病性的。此外,精子巴氏染色和扫描电镜显示,受影响的个体表现出典型的 MMAF 表型,卷曲、弯曲、短、缺失和/或不规则的鞭毛比例很高。患者精子的透射电镜图像显示,精子鞭毛的中央微管(9+0)每一节都明显缺失。

结论

综上所述,这些结果表明 NPHP4 中的纯合错义突变与 MMAF 相关。