Department of Molecular Biology and Genetics, Koç University, Istanbul, Turkey.
Koc University School of Medicine, Istanbul, Turkey.
Methods Mol Biol. 2024;2725:55-78. doi: 10.1007/978-1-0716-3507-0_3.
The primary cilium is a conserved, microtubule-based organelle that protrudes from the surface of most vertebrate cells as well as sensory cells of many organisms. It transduces extracellular chemical and mechanical cues to regulate diverse cellular processes during development and physiology. Loss-of-function studies via RNA interference and CRISPR/Cas9-mediated gene knockouts have been the main tool for elucidating the functions of proteins, protein complexes, and organelles implicated in cilium biology. However, these methods are limited in studying acute spatiotemporal functions of proteins as well as the connection between their cellular positioning and functions. A powerful approach based on inducible recruitment of plus or minus end-directed molecular motors to the protein of interest enables fast and precise control of protein activity in time and in space. In this chapter, we present a chemically inducible heterodimerization method for functional perturbation of centriolar satellites, an emerging membrane-less organelle involved in cilium biogenesis and function. The method we present is based on rerouting of centriolar satellites to the cell center or the periphery in mammalian epithelial cells. We also describe how this method can be applied to study the temporal functions of centriolar satellites during primary cilium assembly, maintenance, and disassembly.
纤毛是一种保守的、基于微管的细胞器,从大多数脊椎动物细胞以及许多生物体的感觉细胞的表面突出。它将细胞外的化学和机械线索转导为调节发育和生理过程中的各种细胞过程。通过 RNA 干扰和 CRISPR/Cas9 介导的基因敲除的功能丧失研究一直是阐明与纤毛生物学相关的蛋白质、蛋白质复合物和细胞器的功能的主要工具。然而,这些方法在研究蛋白质的急性时空功能以及它们的细胞定位和功能之间的联系方面存在局限性。一种基于诱导招募正负定向分子马达到感兴趣的蛋白质的强大方法,能够快速而精确地控制蛋白质在时间和空间上的活性。在本章中,我们提出了一种化学诱导的中心粒卫星异二聚化方法,用于功能干扰中心粒卫星,这是一种新兴的与纤毛发生和功能有关的无膜细胞器。我们提出的方法基于将中心粒卫星重定向到哺乳动物上皮细胞的细胞中心或外周。我们还描述了如何将该方法应用于研究中心粒卫星在初级纤毛组装、维持和解体过程中的时间功能。